BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC19ZG10FM1.SCF screened BAC_end (948 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1375 1558 0.0 >3x_Contig1375 Length = 6996 Score = 1558 bits (786), Expect = 0.0 Identities = 843/860 (98%), Gaps = 2/860 (0%) Strand = Plus / Plus Query: 91 gagctttcttgtttacttcagggtagtaatcatacccatttgaagcattccagacagtcg 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 930 gagctttcttgtttacttcagggtagtaatcatacccatttgaagcattccagacagtcg 989 Query: 151 tcactgaaaactaccaaaagcttatacactgttccggagctgaaaacagaggggacaagc 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 990 tcactgaaaactaccaaaagcttatacactgttccggagctgaaaacagaggggacaagc 1049 Query: 211 cccacgagtagcgaaccgaaacagaagggaaatcgattccatttgactagctcttctcat 270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1050 cccacgagtagcgaaccgaaacagaagggaaatcgattccatttgactagctcttctcat 1109 Query: 271 cagttgttaaataccatcagaaacaagaaacaatctcaggctcaatgtctagttctaact 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1110 cagttgttaaataccatcagaaacaagaaacaatctcaggctcaatgtctagttctaact 1169 Query: 331 gaccagaaagatagaagggtttctgcattgagcagagtatcctctggagaacccttgagg 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1170 gaccagaaagatagaagggtttctgcattgagcagagtatcctctggagaacccttgagg 1229 Query: 391 aaaacattttcgaatcccatcaacagatacgaataccagaagacctacgcggtacgacca 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1230 aaaacattttcgaatcccatcaacagatacgaataccagaagacctacgcggtacgacca 1289 Query: 451 aagagttcaagtgctcgttgcataccgactgttaacaccaatagtaattcttcctcttcg 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1290 aagagttcaagtgctcgttgcataccgactgttaacaccaatagtaattcttcctcttcg 1349 Query: 511 tcacgaaccaattctccgttagaaccagttccagctgtgataactgacttgactgctgaa 570 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1350 tcacgaaccaattctccgttagaaccagttccagctgtgataactgacttgactgctgaa 1409 Query: 571 gaaactttcaaaaagcctatcaacgagaactacacgctagagaataagttcgaaactaat 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1410 gaaactttcaaaaagcctatcaacgagaactacacgctagagaataagttcgaaactaat 1469 Query: 631 aaatcgattgagtccatgaacaacccgagtcccatcagttcaaaccaatcaccattcact 690 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1470 aaatcgattgagtccatgaacaacccgagtcccatcagttcaaaccaatcaccattcact 1529 Query: 691 aaaggaactgcagttgaacttgctaattccattagccgacgtgattctttgacctttgaa 750 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 1530 aaaggaactgcagttgaacttgctaattccataagccgacgtgattctttgaccttgaaa 1589 Query: 751 cagttcaattctgatttgac-aacaatacgccttcaattaaatatacttctagaacgcaa 809 |||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||| Sbjct: 1590 cagttcaattctgatttgacaaacaatacgccttcaataaattatacttctagaacgcaa 1649 Query: 810 ttgaaattagaccatctgagagacanatcagncgaaactcgaaactctattcattgcaca 869 ||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||| Sbjct: 1650 ttgaaattagaccatctgagagacaaatcagccgaaactcgaaactctattcatgcaaca 1709 Query: 870 gatgatattatttatctgttaaaacactctgcaaactccaacgtttcgaac-attcgctt 928 |||||||| |||||||||||||| ||||||||| |||||| |||||||||| ||||||| Sbjct: 1710 gatgatataatttatctgttaaaccactctgcagactccagcgtttcgaacaattcgcta 1769 Query: 929 tcaccacagaaagatgtttg 948 |||||||||||||||||||| Sbjct: 1770 tcaccacagaaagatgtttg 1789 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6316 Number of Sequences: 1807 Number of extensions: 6316 Number of successful extensions: 53 Number of sequences better than 1.0e-20: 1 length of query: 948 length of database: 10,358,551 effective HSP length: 16 effective length of query: 932 effective length of database: 10,329,639 effective search space: 9627223548 effective search space used: 9627223548 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)