BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC19ZG10FM1.SCF screened BAC_end
         (948 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1375                                                        1558   0.0  

>3x_Contig1375 
          Length = 6996

 Score = 1558 bits (786), Expect = 0.0
 Identities = 843/860 (98%), Gaps = 2/860 (0%)
 Strand = Plus / Plus

                                                                        
Query: 91   gagctttcttgtttacttcagggtagtaatcatacccatttgaagcattccagacagtcg 150
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 930  gagctttcttgtttacttcagggtagtaatcatacccatttgaagcattccagacagtcg 989

                                                                        
Query: 151  tcactgaaaactaccaaaagcttatacactgttccggagctgaaaacagaggggacaagc 210
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 990  tcactgaaaactaccaaaagcttatacactgttccggagctgaaaacagaggggacaagc 1049

                                                                        
Query: 211  cccacgagtagcgaaccgaaacagaagggaaatcgattccatttgactagctcttctcat 270
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1050 cccacgagtagcgaaccgaaacagaagggaaatcgattccatttgactagctcttctcat 1109

                                                                        
Query: 271  cagttgttaaataccatcagaaacaagaaacaatctcaggctcaatgtctagttctaact 330
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1110 cagttgttaaataccatcagaaacaagaaacaatctcaggctcaatgtctagttctaact 1169

                                                                        
Query: 331  gaccagaaagatagaagggtttctgcattgagcagagtatcctctggagaacccttgagg 390
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1170 gaccagaaagatagaagggtttctgcattgagcagagtatcctctggagaacccttgagg 1229

                                                                        
Query: 391  aaaacattttcgaatcccatcaacagatacgaataccagaagacctacgcggtacgacca 450
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1230 aaaacattttcgaatcccatcaacagatacgaataccagaagacctacgcggtacgacca 1289

                                                                        
Query: 451  aagagttcaagtgctcgttgcataccgactgttaacaccaatagtaattcttcctcttcg 510
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1290 aagagttcaagtgctcgttgcataccgactgttaacaccaatagtaattcttcctcttcg 1349

                                                                        
Query: 511  tcacgaaccaattctccgttagaaccagttccagctgtgataactgacttgactgctgaa 570
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1350 tcacgaaccaattctccgttagaaccagttccagctgtgataactgacttgactgctgaa 1409

                                                                        
Query: 571  gaaactttcaaaaagcctatcaacgagaactacacgctagagaataagttcgaaactaat 630
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1410 gaaactttcaaaaagcctatcaacgagaactacacgctagagaataagttcgaaactaat 1469

                                                                        
Query: 631  aaatcgattgagtccatgaacaacccgagtcccatcagttcaaaccaatcaccattcact 690
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1470 aaatcgattgagtccatgaacaacccgagtcccatcagttcaaaccaatcaccattcact 1529

                                                                        
Query: 691  aaaggaactgcagttgaacttgctaattccattagccgacgtgattctttgacctttgaa 750
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||
Sbjct: 1530 aaaggaactgcagttgaacttgctaattccataagccgacgtgattctttgaccttgaaa 1589

                                                                        
Query: 751  cagttcaattctgatttgac-aacaatacgccttcaattaaatatacttctagaacgcaa 809
            |||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct: 1590 cagttcaattctgatttgacaaacaatacgccttcaataaattatacttctagaacgcaa 1649

                                                                        
Query: 810  ttgaaattagaccatctgagagacanatcagncgaaactcgaaactctattcattgcaca 869
            ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||   |||
Sbjct: 1650 ttgaaattagaccatctgagagacaaatcagccgaaactcgaaactctattcatgcaaca 1709

                                                                        
Query: 870  gatgatattatttatctgttaaaacactctgcaaactccaacgtttcgaac-attcgctt 928
            |||||||| |||||||||||||| ||||||||| |||||| |||||||||| ||||||| 
Sbjct: 1710 gatgatataatttatctgttaaaccactctgcagactccagcgtttcgaacaattcgcta 1769

                                
Query: 929  tcaccacagaaagatgtttg 948
            ||||||||||||||||||||
Sbjct: 1770 tcaccacagaaagatgtttg 1789


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6316
Number of Sequences: 1807
Number of extensions: 6316
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 948
length of database: 10,358,551
effective HSP length: 16
effective length of query: 932
effective length of database: 10,329,639
effective search space: 9627223548
effective search space used: 9627223548
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)