BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC19ZG10RM1.SCF screened BAC_end (996 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1712 1304 0.0 >3x_Contig1712 Length = 23668 Score = 1304 bits (658), Expect = 0.0 Identities = 712/724 (98%), Gaps = 6/724 (0%) Strand = Plus / Minus Query: 52 gcttgagagatttgacctccaat--caacgtcgtttacatcattgatgaagttcaaactg 109 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 11489 gcttgagagatttgacctccaaatacaacgtcgtttacatcattgatgaagttcaaactg 11430 Query: 110 gtgtcggtgctactggtaagttctggtgccacgaatgggctgacattcaaccaccagttg 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11429 gtgtcggtgctactggtaagttctggtgccacgaatgggctgacattcaaccaccagttg 11370 Query: 170 atttggtcactttctccaagaagttccaatccgctggttactggttccacgatgacagat 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11369 atttggtcactttctccaagaagttccaatccgctggttactggttccacgatgacagat 11310 Query: 230 tcattcctaataaggcttacagacaattcaacacctggtgtggtgatccagctagaatga 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11309 tcattcctaataaggcttacagacaattcaacacctggtgtggtgatccagctagaatga 11250 Query: 290 ttattgctggtgccattggtcaagaaatcgtagacaacaacttggtagatcaatgtgctc 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11249 ttattgctggtgccattggtcaagaaatcgtagacaacaacttggtagatcaatgtgctc 11190 Query: 350 gtgtcggtgattacttgttcgaaaagttggaaaaattgcaagcaaaatacccaaccagat 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11189 gtgtcggtgattacttgttcgaaaagttggaaaaattgcaagcaaaatacccaaccagat 11130 Query: 410 tgatcaacttgagaggtaagaaccgtggtacatttatcgcttttgatttggaaacttcgg 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11129 tgatcaacttgagaggtaagaaccgtggtacatttatcgcttttgatttggaaacttcgg 11070 Query: 470 ctgaaagagaccagctattgaagctcttgaagagcaatggctgcaacgtcggtggttgtg 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11069 ctgaaagagaccagctattgaagctcttgaagagcaatggctgcaacgtcggtggttgtg 11010 Query: 530 ctgaaaagtctgttagactaagaccatccttaactttcgaagaaaagcatgctgacatct 589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11009 ctgaaaagtctgttagactaagaccatccttaactttcgaagaaaagcatgctgacatct 10950 Query: 590 ttgtcgatgctntggaaaagtctattggccaactataaaatactgttctttcagttcctc 649 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10949 ttgtcgatgctttggaaaagtctattggccaactataaaatactgttctttcagttcctc 10890 Query: 650 atcagaacatgtatcaaaccccacacgattagtgtattcttacgtaaatagaagttattt 709 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10889 atcagaacatgtatcaaaccccacacgattagtgtattcttacgtaaatagaagttattt 10830 Query: 710 ataagaaacgccctcatattattataaaatgtgactattattatttatgacagaaacgga 769 ||||| |||| ||||||| | |||||||||||||||| |||| ||||||||| |||||| Sbjct: 10829 ataag-aacg-cctcataattatataaaatgtgactataatta-ttatgacag-aacgga 10774 Query: 770 tttt 773 |||| Sbjct: 10773 tttt 10770 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7550 Number of Sequences: 1807 Number of extensions: 7550 Number of successful extensions: 41 Number of sequences better than 1.0e-20: 1 length of query: 996 length of database: 10,358,551 effective HSP length: 16 effective length of query: 980 effective length of database: 10,329,639 effective search space: 10123046220 effective search space used: 10123046220 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)