BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC19ZG11FM1.SCF screened BAC_end (956 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1588 1544 0.0 >3x_Contig1588 Length = 14692 Score = 1544 bits (779), Expect = 0.0 Identities = 856/874 (97%), Gaps = 7/874 (0%) Strand = Plus / Minus Query: 86 tgtcacaattgactagagaagacccctcccttgtggtaacacatgatgaggagactggac 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8547 tgtcacaattgactagagaagacccctcccttgtggtaacacatgatgaggagactggac 8488 Query: 146 aaactttgttgagcggtatgggggagttacacttggatattgcgagagatagactattga 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8487 aaactttgttgagcggtatgggggagttacacttggatattgcgagagatagactattga 8428 Query: 206 acgaattaaatgcacaagttgatgttgaaagagttattgtctcctacaaagaaacattaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8427 acgaattaaatgcacaagttgatgttgaaagagttattgtctcctacaaagaaacattaa 8368 Query: 266 atcattctacccaagaaaaaacgttggaaaccgatgatggatacaagattaccgctgtaa 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8367 atcattctacccaagaaaaaacgttggaaaccgatgatggatacaagattaccgctgtaa 8308 Query: 326 tcgagccattggacgaagagatgaaagctaaagcgaagaaggacgaagaatggttctcgt 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8307 tcgagccattggacgaagagatgaaagctaaagcgaagaaggacgaagaatggttctcgt 8248 Query: 386 tagcgaatgataataatttcatgatcatggaaaagcacaccaagtatgacccggataaaa 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8247 tagcgaatgataataatttcatgatcatggaaaagcacaccaagtatgacccggataaaa 8188 Query: 446 actggcctttccaagtgccttatgttgctgtcgtgaatgcgttattaccaagttctctag 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8187 actggcctttccaagtgccttatgttgctgtcgtgaatgcgttattaccaagttctctag 8128 Query: 506 ttgcattacaaagaggaggtaagatcggtgggttcccattgagctcttgtgtcattcgca 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8127 ttgcattacaaagaggaggtaagatcggtgggttcccattgagctcttgtgtcattcgca 8068 Query: 566 ttaaaaatgactgggatcttccaattgatgcgccatcgatttcaccattgttgactttaa 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8067 ttaaaaatgactgggatcttccaattgatgcgccatcgatttcaccattgttgactttaa 8008 Query: 626 gcagacagctatttactcagatactcttaggagaagatcaatctaactactctgttttag 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8007 gcagacagctatttactcagatactcttaggagaagatcaatctaactactctgttttag 7948 Query: 686 aaccagtcatgaatgtcgatgtcactgttcaacagcaagacatgggacctgttattcaag 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7947 aaccagtcatgaatgtcgatgtcactgttcaacagcaagacatgggacctgttattcaag 7888 Query: 746 atctgtctagtgcaagaaaagcanatatcttgtctattgaagatgagaatactaatactg 805 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 7887 atctgtctagtgcaagaaaagcaaatatcttgtctattgaagatgagaatactaatactg 7828 Query: 806 tcagcgagtctaacataagggtccaacacatttgcagac-agatgtggctgnctgaggat 864 |||||||||||||||||||| ||||||||| |||||||| ||||||||||| |||||||| Sbjct: 7827 tcagcgagtctaacataaggttccaacaca-ttgcagacaagatgtggctgcctgaggat 7769 Query: 865 cctacttta-aattcgcttaacttggtaaa-aaagacanngcaccnagatggtgaaagcc 922 ||||||||| |||||||| ||||||||||| || |||| || |||||||||||||| Sbjct: 7768 cctactttagaattcgctaaacttggtaaagaaggacaggcacccaagatggtgaaagcc 7709 Query: 923 c-agcacctttg-aagaaat-gttgcatacaaca 953 | |||||||||| ||||||| ||||||||||||| Sbjct: 7708 caagcacctttgaaagaaatggttgcatacaaca 7675 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5973 Number of Sequences: 1807 Number of extensions: 5973 Number of successful extensions: 33 Number of sequences better than 1.0e-20: 1 length of query: 956 length of database: 10,358,551 effective HSP length: 16 effective length of query: 940 effective length of database: 10,329,639 effective search space: 9709860660 effective search space used: 9709860660 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)