BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC19ZH01FM1.SCF screened BAC_end
         (933 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1765                                                        1546   0.0  

>3x_Contig1765 
          Length = 24733

 Score = 1546 bits (780), Expect = 0.0
 Identities = 818/830 (98%), Gaps = 1/830 (0%)
 Strand = Plus / Plus

                                                                         
Query: 82    cggttaacggtgaaatctaaggggcgcaacttttgagataaaagaagttatttaatgctc 141
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17602 cggttaacggtgaaatctaaggggcgcaacttttgagataaaagaagttatttaatgctc 17661

                                                                         
Query: 142   tgattcattacaagctacatgtatatagatttgtataatgttatattcgcgtcttacgta 201
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17662 tgattcattacaagctacatgtatatagatttgtataatgttatattcgcgtcttacgta 17721

                                                                         
Query: 202   taatcatacattatgaatgctatttcatacccgtcgaataaattcaggtatatatatata 261
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17722 taatcatacattatgaatgctatttcatacccgtcgaataaattcaggtatatatatata 17781

                                                                         
Query: 262   aacaaaagtacggtattggtacacaaataatgggtaattcttttttattatcgtatagac 321
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17782 aacaaaagtacggtattggtacacaaataatgggtaattcttttttattatcgtatagac 17841

                                                                         
Query: 322   atgattaatacacagaaacagcacaaacaatacattgtatttaaatacaattgagccgca 381
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17842 atgattaatacacagaaacagcacaaacaatacattgtatttaaatacaattgagccgca 17901

                                                                         
Query: 382   tatgtgattgattgatgagatttcaaataagtgagttgaaaataaataggagtagaggga 441
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17902 tatgtgattgattgatgagatttcaaataagtgagttgaaaataaataggagtagaggga 17961

                                                                         
Query: 442   aaaacagctaacaacaaataagatgaacatcaatgcgcagatattcacgctttatggtca 501
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17962 aaaacagctaacaacaaataagatgaacatcaatgcgcagatattcacgctttatggtca 18021

                                                                         
Query: 502   tatatgttttaccctttttatctcttgaatcgagtgagattccgatagcgaaaaggatga 561
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18022 tatatgttttaccctttttatctcttgaatcgagtgagattccgatagcgaaaaggatga 18081

                                                                         
Query: 562   atgttatgaaaatctgagaacatcattccaaagttgatgtcctaggcctggtagacgtat 621
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18082 atgttatgaaaatctgagaacatcattccaaagttgatgtcctaggcctggtagacgtat 18141

                                                                         
Query: 622   ggagtgccggatagataaatgtttcccgacagtagcgtatccacatttttaaaatatgtt 681
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18142 ggagtgccggatagataaatgtttcccgacagtagcgtatccacatttttaaaatatgtt 18201

                                                                         
Query: 682   ttgaagtgacggtatattctaagaagtaaaataattgaacaaaagcatcaatgaaaagac 741
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18202 ttgaagtgacggtatattctaagaagtaaaataattgaacaaaagcatcaatgaaaagac 18261

                                                                         
Query: 742   actttaaagtataatgatgagaaatgatataattcanatgtcaaaagaaacttattcatc 801
             |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 18262 acttaaaagtataatgatgagaaatgatataattcaaatgtcaaaagaaacttattcatc 18321

                                                                         
Query: 802   gtcttcttcatcttcttcaccaccgttcatgatacccnccttgatatcttttcataactt 861
             ||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||
Sbjct: 18322 gtcttcttcatcttcttcaccaccgttcatgataccacccttgatatctttccataactt 18381

                                                               
Query: 862   accccttgtgtgggtttcgtacccaga-gtcacaccagtatcgaaggcag 910
             |||  |  ||||| ||||||||| ||| ||||||||||||||||||||||
Sbjct: 18382 acctttgttgtggttttcgtaccaagaggtcacaccagtatcgaaggcag 18431


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,638
Number of Sequences: 1807
Number of extensions: 10638
Number of successful extensions: 128
Number of sequences better than 1.0e-20: 1
length of query: 933
length of database: 10,358,551
effective HSP length: 16
effective length of query: 917
effective length of database: 10,329,639
effective search space: 9472278963
effective search space used: 9472278963
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)