BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC19ZH03FM1.SCF screened BAC_end
         (967 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig691                                                         1598   0.0  

>3x_Contig691 
          Length = 2698

 Score = 1598 bits (806), Expect = 0.0
 Identities = 852/861 (98%), Gaps = 5/861 (0%)
 Strand = Plus / Minus

                                                                       
Query: 87  ccgttatcctgatagtttctcaaagtggaggaaacgttcatcaagaccaagattgggtta 146
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963 ccgttatcctgatagtttctcaaagtggaggaaacgttcatcaagaccaagattgggtta 904

                                                                       
Query: 147 cctgtggaattcacaccctcacataaatcagaagatacatagtattctgggaaagtcacc 206
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 cctgtggaattcacaccctcacataaatcagaagatacatagtattctgggaaagtcacc 844

                                                                       
Query: 207 ggagtctttccatccttcaaagtagaaacatgaaccaagtcaccatacttaacaacacct 266
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 ggagtctttccatccttcaaagtagaaacatgaaccaagtcaccatacttaacaacacct 784

                                                                       
Query: 267 ctagcaacctcagcagcgtattcacgagttaggttgaactctttctccttatgagaggac 326
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 ctagcaacctcagcagcgtattcacgagttaggttgaactctttctccttatgagaggac 724

                                                                       
Query: 327 tctctcaatttcttatcgcacccttcgcgtgcagaaacggaatctaaagctaaagccaaa 386
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 tctctcaatttcttatcgcacccttcgcgtgcagaaacggaatctaaagctaaagccaaa 664

                                                                       
Query: 387 gataacaacaaagtactacacttcatgactgaattattaatggctcaataactgatgtcg 446
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gataacaacaaagtactacacttcatgactgaattattaatggctcaataactgatgtcg 604

                                                                       
Query: 447 ttatttggataaacaatctctccgcaagttgtaacccctaagctcatcgctattcaatct 506
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ttatttggataaacaatctctccgcaagttgtaacccctaagctcatcgctattcaatct 544

                                                                       
Query: 507 tgatagaaggttccttaaacctgtcgttgcctatatataaaataaacggtacaaaattta 566
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tgatagaaggttccttaaacctgtcgttgcctatatataaaataaacggtacaaaattta 484

                                                                       
Query: 567 taatgcggtaaattacataatgcaaactaaggtaaggaaggtgctcagcctcaaacttcc 626
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 taatgcggtaaattacataatgcaaactaaggtaaggaaggtgctcagcctcaaacttcc 424

                                                                       
Query: 627 gaaaaagtagtttgtttaccagaagaaaacatttttgcagttcacccaagcctttgcatt 686
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gaaaaagtagtttgtttaccagaagaaaacatttttgcagttcacccaagcctttgcatt 364

                                                                       
Query: 687 gagattggttcggacgaaccatccgcctagatctcggatctaagtttaatcgcagagaca 746
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gagattggttcggacgaaccatccgcctagatctcggatctaagtttaatcgcagagaca 304

                                                                       
Query: 747 tcgccgcataaccacatcgctccagccaggtgtgttntttcttttggntcttatatgagc 806
           |||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||
Sbjct: 303 tcgccgcataaccacatcgctccagccaggtgtgtt-tttctttt-gttcttatatgagc 246

                                                                       
Query: 807 cggtcctttgctgaaaagccagtctgaacgcagg-ccaacgcacacaactcacacacacc 865
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 245 cggtcctttgctgaaaagccagtctgaacgcaggcccaacgcacacaactcacacacacc 186

                                                                       
Query: 866 cttaaatggaaaacgttga-gcattgctaagtagatagctgctatgagctttgtttatgc 924
           || |||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 185 ctcaaatgg-aaacgttgaggcattgctaagtagatagctgctatgagccttgtttatgc 127

                                
Query: 925 caaacatgcttataccgttgg 945
           ||||||||||||||| |||||
Sbjct: 126 caaacatgcttatacggttgg 106


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5455
Number of Sequences: 1807
Number of extensions: 5455
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 967
length of database: 10,358,551
effective HSP length: 16
effective length of query: 951
effective length of database: 10,329,639
effective search space: 9823486689
effective search space used: 9823486689
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)