BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC19ZH03FM1.SCF screened BAC_end (967 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig691 1598 0.0 >3x_Contig691 Length = 2698 Score = 1598 bits (806), Expect = 0.0 Identities = 852/861 (98%), Gaps = 5/861 (0%) Strand = Plus / Minus Query: 87 ccgttatcctgatagtttctcaaagtggaggaaacgttcatcaagaccaagattgggtta 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 963 ccgttatcctgatagtttctcaaagtggaggaaacgttcatcaagaccaagattgggtta 904 Query: 147 cctgtggaattcacaccctcacataaatcagaagatacatagtattctgggaaagtcacc 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 903 cctgtggaattcacaccctcacataaatcagaagatacatagtattctgggaaagtcacc 844 Query: 207 ggagtctttccatccttcaaagtagaaacatgaaccaagtcaccatacttaacaacacct 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 843 ggagtctttccatccttcaaagtagaaacatgaaccaagtcaccatacttaacaacacct 784 Query: 267 ctagcaacctcagcagcgtattcacgagttaggttgaactctttctccttatgagaggac 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 783 ctagcaacctcagcagcgtattcacgagttaggttgaactctttctccttatgagaggac 724 Query: 327 tctctcaatttcttatcgcacccttcgcgtgcagaaacggaatctaaagctaaagccaaa 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 723 tctctcaatttcttatcgcacccttcgcgtgcagaaacggaatctaaagctaaagccaaa 664 Query: 387 gataacaacaaagtactacacttcatgactgaattattaatggctcaataactgatgtcg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 663 gataacaacaaagtactacacttcatgactgaattattaatggctcaataactgatgtcg 604 Query: 447 ttatttggataaacaatctctccgcaagttgtaacccctaagctcatcgctattcaatct 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 603 ttatttggataaacaatctctccgcaagttgtaacccctaagctcatcgctattcaatct 544 Query: 507 tgatagaaggttccttaaacctgtcgttgcctatatataaaataaacggtacaaaattta 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 543 tgatagaaggttccttaaacctgtcgttgcctatatataaaataaacggtacaaaattta 484 Query: 567 taatgcggtaaattacataatgcaaactaaggtaaggaaggtgctcagcctcaaacttcc 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 483 taatgcggtaaattacataatgcaaactaaggtaaggaaggtgctcagcctcaaacttcc 424 Query: 627 gaaaaagtagtttgtttaccagaagaaaacatttttgcagttcacccaagcctttgcatt 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 423 gaaaaagtagtttgtttaccagaagaaaacatttttgcagttcacccaagcctttgcatt 364 Query: 687 gagattggttcggacgaaccatccgcctagatctcggatctaagtttaatcgcagagaca 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 gagattggttcggacgaaccatccgcctagatctcggatctaagtttaatcgcagagaca 304 Query: 747 tcgccgcataaccacatcgctccagccaggtgtgttntttcttttggntcttatatgagc 806 |||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||| Sbjct: 303 tcgccgcataaccacatcgctccagccaggtgtgtt-tttctttt-gttcttatatgagc 246 Query: 807 cggtcctttgctgaaaagccagtctgaacgcagg-ccaacgcacacaactcacacacacc 865 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 245 cggtcctttgctgaaaagccagtctgaacgcaggcccaacgcacacaactcacacacacc 186 Query: 866 cttaaatggaaaacgttga-gcattgctaagtagatagctgctatgagctttgtttatgc 924 || |||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 185 ctcaaatgg-aaacgttgaggcattgctaagtagatagctgctatgagccttgtttatgc 127 Query: 925 caaacatgcttataccgttgg 945 ||||||||||||||| ||||| Sbjct: 126 caaacatgcttatacggttgg 106 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5455 Number of Sequences: 1807 Number of extensions: 5455 Number of successful extensions: 40 Number of sequences better than 1.0e-20: 1 length of query: 967 length of database: 10,358,551 effective HSP length: 16 effective length of query: 951 effective length of database: 10,329,639 effective search space: 9823486689 effective search space used: 9823486689 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)