BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC19ZH04RM1.SCF screened BAC_end (947 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1210 1705 0.0 >3x_Contig1210 Length = 6392 Score = 1705 bits (860), Expect = 0.0 Identities = 887/893 (99%), Gaps = 3/893 (0%) Strand = Plus / Minus Query: 49 aggtgaataaattgtgagacaaagaaaaaaaagtaagaagagaaaaagttgtaaaaccct 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5461 aggtgaataaattgtgagacaaagaaaaaaaagtaagaagagaaaaagttgtaaaaccct 5402 Query: 109 tcagtaatactaaaagagtcatcaaagaaaccgtgtcctaccacgtcaatagtttcggtt 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5401 tcagtaatactaaaagagtcatcaaagaaaccgtgtcctaccacgtcaatagtttcggtt 5342 Query: 169 aacatctttaattaaaatgggaggttggtcataacaaatatcattatatcttggtagatt 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5341 aacatctttaattaaaatgggaggttggtcataacaaatatcattatatcttggtagatt 5282 Query: 229 ttcgatggaactttatcattcttctcgaacggaaggaactaaagagagtagtgtctgggc 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5281 ttcgatggaactttatcattcttctcgaacggaaggaactaaagagagtagtgtctgggc 5222 Query: 289 atgtttcaatgatatcgtatctctcagctaattacacttattgctttggttcaccacctt 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5221 atgtttcaatgatatcgtatctctcagctaattacacttattgctttggttcaccacctt 5162 Query: 349 gttggttagaagcgtcgttcttgtacatttgttcgaacaacttcatggaagcggtttgta 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5161 gttggttagaagcgtcgttcttgtacatttgttcgaacaacttcatggaagcggtttgta 5102 Query: 409 attcttcagtcttggtcttcaactcttcagcgtcgacttcttcaccggcttgaactctag 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5101 attcttcagtcttggtcttcaactcttcagcgtcgacttcttcaccggcttgaactctag 5042 Query: 469 cgaccaattctctcaaagcagcgacttggtccttaaccttttgagcttcagccttgtcca 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5041 cgaccaattctctcaaagcagcgacttggtccttaaccttttgagcttcagccttgtcca 4982 Query: 529 atttttcttcgaattccttcaaagaagcttcggtatcgttggccaattggtcacccttgt 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4981 atttttcttcgaattccttcaaagaagcttcggtatcgttggccaattggtcacccttgt 4922 Query: 589 tggcggtttcaatagccttctttctggtttcatcttgttctctgaacttttcagcatcgc 648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4921 tggcggtttcaatagccttctttctggtttcatcttgttctctgaacttttcagcatcgc 4862 Query: 649 taaccatttgctcgatttcagattcggacaaaccggaagaaccagcaacagtgatggaag 708 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4861 taaccatttgctcgatttcagattcggacaaaccggaagaaccagcaacagtgatggaag 4802 Query: 709 catccttgttggaagccttgtctctagcagagacgttgatgataccatcggcatcaatat 768 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4801 catccttgttggaagccttgtctctagcagagacgttgatgataccatcggcatcaatat 4742 Query: 769 cgaaagaaacttcgatttgtgggacaccctttggnagct-gtgggataccagacaaagtg 827 |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 4741 cgaaagaaacttcgatttgtgggacaccctttgg-agctggtgggataccagacaaagtg 4683 Query: 828 aagttaccgatcaacttgttgtctctgaccaattctctttcaccttggaaaactcttgat 887 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 4682 aagttaccgatcaacttgttgtctctgaccaattctctttcaccttggaaaactc-tgat 4624 Query: 888 tnccacgnaggtttgaccagcagcagcagtggagaagatttgagacttcntgg 940 | ||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 4623 ttccacggaggtttgaccagcagcagcagtggagaagatttgagacttcttgg 4571 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8652 Number of Sequences: 1807 Number of extensions: 8652 Number of successful extensions: 63 Number of sequences better than 1.0e-20: 1 length of query: 947 length of database: 10,358,551 effective HSP length: 16 effective length of query: 931 effective length of database: 10,329,639 effective search space: 9616893909 effective search space used: 9616893909 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)