BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZA01RM1.SCF screened BAC_end (992 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1345 1009 0.0 >3x_Contig1345 Length = 7291 Score = 1009 bits (509), Expect = 0.0 Identities = 615/641 (95%), Gaps = 7/641 (1%) Strand = Plus / Minus Query: 230 acggtggttggctgtaccctgtaacaacaggcatcaccacgccagttgcaataggaacaa 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7288 acggtggttggctgtaccctgtaacaacaggcatcaccacgccagttgcaataggaacaa 7229 Query: 290 ctggtgctgctggctgagataacgaccgaacttcagcaggacgtgcaacaggaggagctt 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7228 ctggtgctgctggctgagataacgaccgaacttcagcaggacgtgcaacaggaggagctt 7169 Query: 350 catgaacaggagacggatcacgtaaattctcacgagtcggtgtcctgcttggtaaacttg 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7168 catgaacaggagacggatcacgtaaattctcacgagtcggtgtcctgcttggtaaacttg 7109 Query: 410 agacggaagatttggatcttttttcaaaaacaacatcattgacttcagcatcatcttcat 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7108 agacggaagatttggatcttttttcaaaaacaacatcattgacttcagcatcatcttcat 7049 Query: 470 cgtcaataatacgagacattgggtccgaaggcaaagtagggattgtaatcaagtttttta 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7048 cgtcaataatacgagacattgggtccgaaggcaaagtagggattgtaatcaagtttttta 6989 Query: 530 gaggttgaacagtattacaatcaaaataaaactcatttaaacgtgcacattgctctgtat 589 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 6988 gaggttgaacagtattacaatcaaaataaaactcatttaaacgtgcacattgctcggtat 6929 Query: 590 acctatcaaacaacccacttaaagcatcataatcacccattttgttatacaaagctttca 649 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 6928 acctatcaaacaacccacttaaagcatcataatcacccatttgtttatacaaagctttca 6869 Query: 650 tcatagacgtaacaaacttgaatatttcatatgttttactaaccaaaggaattaagaacg 709 |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||| Sbjct: 6868 tcatagacgtaacaaacttgaatattccatatgtttcactaaccaaaggaattaag-acg 6810 Query: 710 ggccttctac-atctaaaccagatgaaaaactaccaaacccactctttctggtagatatg 768 | | ||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 6809 gcgcctctacaatctaaaccagatgaaaaactaccaaacccactctttctgttagatatg 6750 Query: 769 cccgcaaaga-caatttcttgcag-tatcagcaacttcttcagaattcatt-aatcaaga 825 |||||||||| |||||||| || |||||||||| |||||| ||||||| |||||||| Sbjct: 6749 cccgcaaagatcaatttctgcaagttatcagcaacatcttcaagattcattaaatcaaga 6690 Query: 826 a-agtcttgtacccttcg-taggatcagaacctgaaaccaa 864 | ||||| ||| |||||| |||||||||| |||||||||| Sbjct: 6689 acagtctcgtaaccttcgttaggatcagacactgaaaccaa 6649 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7945 Number of Sequences: 1807 Number of extensions: 7945 Number of successful extensions: 74 Number of sequences better than 1.0e-20: 1 length of query: 992 length of database: 10,358,551 effective HSP length: 16 effective length of query: 976 effective length of database: 10,329,639 effective search space: 10081727664 effective search space used: 10081727664 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)