BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZA03FM1.SCF screened BAC_end (1013 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1398 1209 0.0 >3x_Contig1398 Length = 9161 Score = 1209 bits (610), Expect = 0.0 Identities = 695/716 (97%), Gaps = 7/716 (0%) Strand = Plus / Plus Query: 86 catatttaggagtaatattggaatggatccatgtacttactcctgttggcaatgcaaaga 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3321 catatttaggagtaatattggaatggatccatgtacttactcctgttggcaatgcaaaga 3380 Query: 146 aagttggtattgtgaaatgtaaaggactggtttttttgtctgggctaacggacacagttg 205 ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 3381 aagttggtattgtgaaatgtaaaggactggtaatcttgtctgggctaacggacacagttg 3440 Query: 206 agctaaagcctaaaacgtaggttgcngttgcaactatttgttctgattctttcaacataa 265 ||||||||||||||||| |||| || | |||||||||||||||||||||||||||||||| Sbjct: 3441 agctaaagcctaaaacggaggtagctggtgcaactatttgttctgattctttcaacataa 3500 Query: 266 tatgccaactggatccttgtccattgagtgcaaaaatgcctctccctacgattttatttc 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3501 tatgccaactggatccttgtccattgagtgcaaaaatgcctctccctacgattttatttc 3560 Query: 326 catttattgacacatctccggaatagcaaagtatattattcagaggatcattgaccgtcc 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3561 catttattgacacatctccggaatagcaaagtatattattcagaggatcattgaccgtcc 3620 Query: 386 atccttgctcataatcatcaaggttaataactgtgacgttgtttagccttgtagatgcgg 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3621 atccttgctcataatcatcaaggttaataactgtgacgttgtttagccttgtagatgcgg 3680 Query: 446 tacagatcagattaacaggctcatcggccgtggataatgtgacgaatccggtatcttttt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3681 tacagatcagattaacaggctcatcggccgtggataatgtgacgaatccggtatcttttt 3740 Query: 506 gtttttggatagcgaacagcttcgtaagctctatgtccttcaactcatttgaactatcaa 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3741 gtttttggatagcgaacagcttcgtaagctctatgtccttcaactcatttgaactatcaa 3800 Query: 566 taacggtgatattgttgagcttacctaccacagagctggaacttggtatccgaagcagaa 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3801 taacggtgatattgttgagcttacctaccacagagctggaacttggtatccgaagcagaa 3860 Query: 626 gtgagtcatgcaatggctgtagatctgggagttccacaaatggtcccgttccagtacctt 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3861 gtgagtcatgcaatggctgtagatctgggagttccacaaatggtcccgttccagtacctt 3920 Query: 686 gttttctggcggacaaaattcgt-atgggtgttcgtaacaccgcattcccggagaa-ctt 743 |||||||||||||| |||||||| |||| ||| ||||||||||||||||||||||| ||| Sbjct: 3921 gttttctggcggac-aaattcgtaatggctgtccgtaacaccgcattcccggagaacctt 3979 Query: 744 tttactgga--ttaaagagacatcctttc-caacaatca-tatagatgatagaaat 795 | |||||| | |||||||||||||| | |||||||| |||||||||||||||| Sbjct: 3980 ctcactggaattaaaagagacatccttccaaaacaatcagtatagatgatagaaat 4035 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7096 Number of Sequences: 1807 Number of extensions: 7096 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 1013 length of database: 10,358,551 effective HSP length: 16 effective length of query: 997 effective length of database: 10,329,639 effective search space: 10298650083 effective search space used: 10298650083 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)