BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZB01RM1.SCF screened BAC_end (1032 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1444 1415 0.0 >3x_Contig1444 Length = 7580 Score = 1415 bits (714), Expect = 0.0 Identities = 843/875 (96%), Gaps = 9/875 (1%) Strand = Plus / Plus Query: 48 cttcgacaatgcatcattcaaaaataaagtcattcggccatactcatcggtcctcgatcc 107 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 4135 cttcgacaatgcatcattcaaaaagaaagtcattcggccatactcatcggtcctcgatcc 4194 Query: 108 aattataaagatatgataataaagcatcatttggaggctttaagatcgacacacaacgaa 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4195 aattataaagatatgataataaagcatcatttggaggctttaagatcgacacacaacgaa 4254 Query: 168 caattcattgttatcaacttaaatggctctttacattcggaaaactctgcaattaacatt 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4255 caattcattgttatcaacttaaatggctctttacattcggaaaactctgcaattaacagt 4314 Query: 228 tttgttgaacaattagaattcgaacttgcaaacagaaacgttaattcatcaaaaaaagtt 287 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4315 attgctgaacaattagaattcgaacttgcaaacagaaacgttaattcatcaaaaaaagtt 4374 Query: 288 aaagcagaagaattaggtttatctgaaggtactttgacagaagtctttgataacattcta 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4375 aaagcagaagaattaggtttatctgaaggtactttgacagaagtctttgataacattcta 4434 Query: 348 agattgttggactcatttactgtgactcctctaaagggtgtacactcacagaaagaaaaa 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4435 agattgttggactcatttactgtgactcctctaaagggtgtacactcacagaaagaaaaa 4494 Query: 408 tcagagcacgtaacgctagtgttcatatttgatgaaattgacaaatttgctggaccagtg 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4495 tcagagcacgtaacgctagtgttcatatttgatgaaattgacaaatttgctggaccagtg 4554 Query: 468 agacagacacttttgtataatttatttgacctagtagagacttcaaggataccagtttgt 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4555 agacagacacttttgtataatttatttgacctagtagagacttcaaggataccagtttgt 4614 Query: 528 gttcttggtcttactacaaagttggcaatcatgcaatttcttgaaaacagagtgaaatcc 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4615 gttcttggtcttactacaaagttggcaatcatgcaatttcttgaaaacagagtgaaatcc 4674 Query: 588 cggttttctcagcgaatcatatatatgccatcaatctcggattatgatcaattcaagcat 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4675 cggttttctcagcgaatcatatatatgccatcaatctcggattatgatcaattcaagcat 4734 Query: 648 gtattcaaagagctcttagaggtggatgattcaacaattcctgatcagccncgatggaac 707 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 4735 gtattcaaagagctcttagaggtggatgattcaacaattcctgatcagcttcgatggaac 4794 Query: 708 caagttcttggatgagacttntaaaaatgaccattcaaaga-ttctcgtattctgcgtta 766 | |||||||||||||||||| ||||||||| ||||| ||| |||||||||||||||| | Sbjct: 4795 c-agttcttggatgagactttaaaaaatgacgattcagagatttctcgtattctgcgtca 4853 Query: 767 ggactacgagaac-tccaagat-tacaactatt-caaaac-ccatatttcccaaagttgc 822 | ||||||||||| || ||||| |||||||||| |||||| |||||||||||| |||||| Sbjct: 4854 gaactacgagaacttcaaagatatacaactattacaaaacgccatatttcccacagttgc 4913 Query: 823 cttgtctaaaacatttcctgaactagttgggaagcttcaaaacttgccgc-anataaaaa 881 |||||||||||||| | |||||||||||| | ||| ||||||| ||| || | ||||||| Sbjct: 4914 cttgtctaaaacatattctgaactagttgag-agcatcaaaacatgcagcaaaataaaaa 4972 Query: 882 agtacttggcgaa-caacttttaaattcaatttca 915 ||||||||||||| ||||| ||| ||||||||||| Sbjct: 4973 agtacttggcgaatcaactcttagattcaatttca 5007 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8717 Number of Sequences: 1807 Number of extensions: 8717 Number of successful extensions: 63 Number of sequences better than 1.0e-20: 1 length of query: 1032 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1016 effective length of database: 10,329,639 effective search space: 10494913224 effective search space used: 10494913224 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)