BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC1ZB01RM1.SCF screened BAC_end
         (1032 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1444                                                        1415   0.0  

>3x_Contig1444 
          Length = 7580

 Score = 1415 bits (714), Expect = 0.0
 Identities = 843/875 (96%), Gaps = 9/875 (1%)
 Strand = Plus / Plus

                                                                        
Query: 48   cttcgacaatgcatcattcaaaaataaagtcattcggccatactcatcggtcctcgatcc 107
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 4135 cttcgacaatgcatcattcaaaaagaaagtcattcggccatactcatcggtcctcgatcc 4194

                                                                        
Query: 108  aattataaagatatgataataaagcatcatttggaggctttaagatcgacacacaacgaa 167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4195 aattataaagatatgataataaagcatcatttggaggctttaagatcgacacacaacgaa 4254

                                                                        
Query: 168  caattcattgttatcaacttaaatggctctttacattcggaaaactctgcaattaacatt 227
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 4255 caattcattgttatcaacttaaatggctctttacattcggaaaactctgcaattaacagt 4314

                                                                        
Query: 228  tttgttgaacaattagaattcgaacttgcaaacagaaacgttaattcatcaaaaaaagtt 287
             ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4315 attgctgaacaattagaattcgaacttgcaaacagaaacgttaattcatcaaaaaaagtt 4374

                                                                        
Query: 288  aaagcagaagaattaggtttatctgaaggtactttgacagaagtctttgataacattcta 347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4375 aaagcagaagaattaggtttatctgaaggtactttgacagaagtctttgataacattcta 4434

                                                                        
Query: 348  agattgttggactcatttactgtgactcctctaaagggtgtacactcacagaaagaaaaa 407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4435 agattgttggactcatttactgtgactcctctaaagggtgtacactcacagaaagaaaaa 4494

                                                                        
Query: 408  tcagagcacgtaacgctagtgttcatatttgatgaaattgacaaatttgctggaccagtg 467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4495 tcagagcacgtaacgctagtgttcatatttgatgaaattgacaaatttgctggaccagtg 4554

                                                                        
Query: 468  agacagacacttttgtataatttatttgacctagtagagacttcaaggataccagtttgt 527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4555 agacagacacttttgtataatttatttgacctagtagagacttcaaggataccagtttgt 4614

                                                                        
Query: 528  gttcttggtcttactacaaagttggcaatcatgcaatttcttgaaaacagagtgaaatcc 587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4615 gttcttggtcttactacaaagttggcaatcatgcaatttcttgaaaacagagtgaaatcc 4674

                                                                        
Query: 588  cggttttctcagcgaatcatatatatgccatcaatctcggattatgatcaattcaagcat 647
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4675 cggttttctcagcgaatcatatatatgccatcaatctcggattatgatcaattcaagcat 4734

                                                                        
Query: 648  gtattcaaagagctcttagaggtggatgattcaacaattcctgatcagccncgatggaac 707
            |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 4735 gtattcaaagagctcttagaggtggatgattcaacaattcctgatcagcttcgatggaac 4794

                                                                        
Query: 708  caagttcttggatgagacttntaaaaatgaccattcaaaga-ttctcgtattctgcgtta 766
            | ||||||||||||||||||  ||||||||| ||||| ||| |||||||||||||||| |
Sbjct: 4795 c-agttcttggatgagactttaaaaaatgacgattcagagatttctcgtattctgcgtca 4853

                                                                        
Query: 767  ggactacgagaac-tccaagat-tacaactatt-caaaac-ccatatttcccaaagttgc 822
            | ||||||||||| || ||||| |||||||||| |||||| |||||||||||| ||||||
Sbjct: 4854 gaactacgagaacttcaaagatatacaactattacaaaacgccatatttcccacagttgc 4913

                                                                        
Query: 823  cttgtctaaaacatttcctgaactagttgggaagcttcaaaacttgccgc-anataaaaa 881
            |||||||||||||| | |||||||||||| | ||| ||||||| ||| || | |||||||
Sbjct: 4914 cttgtctaaaacatattctgaactagttgag-agcatcaaaacatgcagcaaaataaaaa 4972

                                               
Query: 882  agtacttggcgaa-caacttttaaattcaatttca 915
            ||||||||||||| ||||| ||| |||||||||||
Sbjct: 4973 agtacttggcgaatcaactcttagattcaatttca 5007


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8717
Number of Sequences: 1807
Number of extensions: 8717
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 1
length of query: 1032
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1016
effective length of database: 10,329,639
effective search space: 10494913224
effective search space used: 10494913224
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)