BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZB02FM1.SCF screened BAC_end (1022 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1310 858 0.0 >3x_Contig1310 Length = 7790 Score = 858 bits (433), Expect = 0.0 Identities = 444/448 (99%) Strand = Plus / Minus Query: 88 agaagttaatccgatgagtagtttagtgtttaatgctgttattagttccagttctttctg 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2015 agaagttaatccgatgagtagtttagtgtttaatgctgttattagttccagttctttctg 1956 Query: 148 ttctcaacttttcgatgacttttcgaaaacagaaggggttacccggggatgtcaagacca 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1955 ttctcaacttttcgatgacttttcgaaaacagaaggggttacccggggatgtcaagacca 1896 Query: 208 gccccacatatttgctgtgacatcgnttaataactatatatctggttgacagctatgcct 267 |||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 1895 gccccacatatttgctgtgacaccgtcaaataactatatatctggttgacagctatgcct 1836 Query: 268 cattagaatgatttagctagtctacaatgactacagatggagtttgtaattgcattcgct 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1835 cattagaatgatttagctagtctacaatgactacagatggagtttgtaattgcattcgct 1776 Query: 328 cattcaggctttttatagggtatttttatgaggttttagcttctcattccacattgtaga 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1775 cattcaggctttttatagggtatttttatgaggttttagcttctcattccacattgtaga 1716 Query: 388 atgtggcatcggaaacgacgcaggtatcaagaaattaaacgataggtgatcccagcaaca 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1715 atgtggcatcggaaacgacgcaggtatcaagaaattaaacgataggtgatcccagcaaca 1656 Query: 448 gcagctacgctgctgttgcattgattggggatgtgaattcagcatgctagtactagcgta 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1655 gcagctacgctgctgttgcattgattggggatgtgaattcagcatgctagtactagcgta 1596 Query: 508 gtactgtaacggggaggaggggggggat 535 |||||||||||||||||||||||||||| Sbjct: 1595 gtactgtaacggggaggaggggggggat 1568 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 23,702 Number of Sequences: 1807 Number of extensions: 23702 Number of successful extensions: 571 Number of sequences better than 1.0e-20: 1 length of query: 1022 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1006 effective length of database: 10,329,639 effective search space: 10391616834 effective search space used: 10391616834 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)