BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC1ZB06RM1.SCF screened BAC_end
         (1021 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1608                                                        1836   0.0  

>3x_Contig1608 
          Length = 13037

 Score = 1836 bits (926), Expect = 0.0
 Identities = 968/979 (98%), Gaps = 3/979 (0%)
 Strand = Plus / Plus

                                                                        
Query: 44   ctttcactttgaagcatttcgtacataggatcaatttctgattttttcagctttccttta 103
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6574 ctttcactttgaagcatttcgtacataggatcaatttctgattttttcagctttccttta 6633

                                                                        
Query: 104  ttttactgcaaagagaagccttagaggtctgaagccaactttgacatttaggtcagatca 163
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6634 ttttactgcaaagagaagccttagaggtctgaagccaactttgacatttaggtcagatca 6693

                                                                        
Query: 164  actaaagatagacctaatgcaatatatacaattgtaaggaatcaaaagcatttaggttta 223
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6694 actaaagatagacctaatgcaatatatacaattgtaaggaatcaaaagcatttaggttta 6753

                                                                        
Query: 224  atttggtacagtgtaatggatgagcatcgatcaaggacaccaagtatagatagtaggaat 283
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6754 atttggtacagtgtaatggatgagcatcgatcaaggacaccaagtatagatagtaggaat 6813

                                                                        
Query: 284  tatgctattccagaagcggattacctcccggcaggcattgacatagatagaaacggtgtg 343
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6814 tatgctattccagaagcggattacctcccggcaggcattgacatagatagaaacggtgtg 6873

                                                                        
Query: 344  tctgaatcagatgattcttccgatgatgatgctcaaagttcactatttccaacagaatcc 403
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6874 tctgaatcagatgattcttccgatgatgatgctcaaagttcactatttccaacagaatcc 6933

                                                                        
Query: 404  agtggtacgttgtggatgaaccaaatccaagatacgcctatgtttgactcaagtaaattt 463
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6934 agtggtacgttgtggatgaaccaaatccaagatacgcctatgtttgactcaagtaaattt 6993

                                                                        
Query: 464  ctatttgagtcggtaaataatgcaataaacgatattgacttttcggaatcccttgcaata 523
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6994 ctatttgagtcggtaaataatgcaataaacgatattgacttttcggaatcccttgcaata 7053

                                                                        
Query: 524  caagcaaagacatctgcattgattaattcgaagagccgggagttgaaaggccttattaag 583
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7054 caagcaaagacatctgcattgattaattcgaagagccgggagttgaaaggccttattaag 7113

                                                                        
Query: 584  caattacaggagaaagtagattactataatgaaaggtttaagcgcggagctgttgtatca 643
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7114 caattacaggagaaagtagattactataatgaaaggtttaagcgcggagctgttgtatca 7173

                                                                        
Query: 644  agccaattgaaggttaacctacagatgctttcgaaacggattgcaactttggatgacctc 703
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7174 agccaattgaaggttaacctacagatgctttcgaaacggattgcaactttggatgacctc 7233

                                                                        
Query: 704  ttctccaaacagtttcctatcgaatataatcagtcgaaggaaaaggtgatggaacgaaca 763
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7234 ttctccaaacagtttcctatcgaatataatcagtcgaaggaaaaggtgatggaacgaaca 7293

                                                                        
Query: 764  ttaaatgattgattattgaaaaatatatatacatanccttgtgtnttntattggaaaagc 823
            ||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||
Sbjct: 7294 ttaaatgattgattattgaaaaatatatatacata-ccttgtgttttttattggaaaagc 7352

                                                                        
Query: 824  cattattaagtttgttgttaaagagagcagttatcctactctccacacttcgacttcaac 883
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 7353 cattattaagtttgttgttaaagagagcagttatcctactctccacacttcgactccaac 7412

                                                                        
Query: 884  tatgtgaaatttggaaaccttctctgcttaagatatcattaccgaatgtcatgcttggga 943
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7413 tatgtgaaatttgg-aaccttctctgcttaagatatcattaccgaatgtcatgcttggga 7471

                                                                        
Query: 944  acgttacttctctgaacaagccgtcgtct-ttcatagcacataatgtncatcgccagctc 1002
            |||||||| |||||||||||||||||||| | |||||  |||||||| ||||||||||||
Sbjct: 7472 acgttactcctctgaacaagccgtcgtctatccatagaccataatgtccatcgccagctc 7531

                               
Query: 1003 ccatggacaaaaatgtgct 1021
            |||||||||||||||||||
Sbjct: 7532 ccatggacaaaaatgtgct 7550


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8088
Number of Sequences: 1807
Number of extensions: 8088
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 1021
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1005
effective length of database: 10,329,639
effective search space: 10381287195
effective search space used: 10381287195
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)