BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZB07FM1.SCF screened BAC_end (1058 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig748 1467 0.0 >3x_Contig748 Length = 2621 Score = 1467 bits (740), Expect = 0.0 Identities = 864/899 (96%), Gaps = 5/899 (0%) Strand = Plus / Plus Query: 93 caaaaaacagagcaagatcttcttaatgagtctcgcagacttggaactgcggttggttcc 152 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 caaaaaacagagcaagatcttcttaatgagtctcgcagacttggaactgcggttggttcc 268 Query: 153 aagagtaggttgaaactcttgagatcaaaaatggaagatattgagaaccaagcaagagag 212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 aagagtaggttgaaactcttgagatcaaaaatggaagatattgagaaccaagcaagagag 328 Query: 213 cttgaaatgacaaattttgctgatgtcaaacccaagcagaaccagaaatttaaggagcaa 272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329 cttgaaatgacaaattttgctgatgtcaaacccaagcagaaccagaaatttaaggagcaa 388 Query: 273 gttaaaggtcaacaagccacaaaattagctgagttaaggaaaaagctagcaataatacaa 332 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 gttaaaggtcaacaagccacaaaattagctgagttaaggaaaaagctagcaataatacaa 448 Query: 333 aatgaaagcaacgatataacaaagttcaatattgaggccagagtgaatgaattattccaa 392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 aatgaaagcaacgatataacaaagttcaatattgaggccagagtgaatgaattattccaa 508 Query: 393 gacaaaaagttagctgccttggatagattgaaagacttagagaataaatacaatggtttc 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 509 gacaaaaagttagctgccttggatagattgaaagacttagagaataaatacaatggtttc 568 Query: 453 cacattgactttgcagatgaccctgagttaaaagagctcctgacgcagtccagtaatggc 512 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 cacattgactttgcagatgaccctgagttaaaagagctcctgacgcagtccagtaatggc 628 Query: 513 ggaccttctttggatccaacaattgtacaaagaaaggtagaagaaatgaattcaattatt 572 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 629 ggaccttctttggatccaacaattgtacaaagaaaggtagaagaaatgaattcaattatt 688 Query: 573 gatgaactcaatgcattgaaagaagaaatgaaaaatagacctaaaaccggctcaagttca 632 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 gatgaactcaatgcattgaaagaagaaatgaaaaatagacctaaaaccggctcaagttca 748 Query: 633 tcatcttcgtcatcgttgtcttcggcatcttcctctttagaagatggttcatcacaatca 692 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 749 tcatcttcgtcatcgttgtcttcggcatcttcctcttcagaagatggttcatcacaatca 808 Query: 693 caagcatctcatgggtcggatattgtatccaatggatcatcattcctttgatcattatct 752 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 809 caagcatctcatgggtcggatattgtatccaatggatcatcattccttgaatcattatct 868 Query: 753 tcaaagtattcaacttggac-acagaccgccacgtttacgaatggtggtcgtgtgggacg 811 |||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 869 caaaagtattcaac-tggacaacagaccgccacgtctacgaatggtggtcgtgtgggacg 927 Query: 812 cgagactatgtatcctggaagcggttatcattagaaatcggtttttgataggtt-aagaa 870 |||||||| |||||||||||||||||||||| |||||| |||| ||||||| ||||| Sbjct: 928 cgagactaggtatcctggaagcggttatcatagaaaatcgtttttgaataggttaaagaa 987 Query: 871 tactacagtgaaccc-acagggacgagcgaccttttgcc-ncgtttttgacttagctaaa 928 ||||||||||||||| |||| ||||||||| | | |||| ||||||||||| ||||||| Sbjct: 988 tactacagtgaacccaacagcgacgagcgaacatctgccaccgtttttgactgagctaaa 1047 Query: 929 atcaaagtttaaatggacgaagaacttcgaggatggccctgtgggtattggcatatctg 987 |||||| ||||| ||| | || |||| |||| ||||||||||||||||||||||| Sbjct: 1048 atcaaaagttaaaatgacagatgacatcgatgatgtccctgtgggtattggcatatctg 1106 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8640 Number of Sequences: 1807 Number of extensions: 8640 Number of successful extensions: 80 Number of sequences better than 1.0e-20: 1 length of query: 1058 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1042 effective length of database: 10,329,639 effective search space: 10763483838 effective search space used: 10763483838 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)