BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC1ZB12FM1.SCF screened BAC_end
         (1016 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1735                                                        1526   0.0  

>3x_Contig1735 
          Length = 19486

 Score = 1526 bits (770), Expect = 0.0
 Identities = 852/871 (97%), Gaps = 7/871 (0%)
 Strand = Plus / Minus

                                                                         
Query: 86    agataatctggcttctgtgtatatatagttacgtaacgagcttctaatggaattatcgac 145
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18466 agataatctggcttctgtgtatatatagttacgtaacgagcttctaatggaattatcgac 18407

                                                                         
Query: 146   aggttcgatcggtcccaaaacaatagacaggacagcgttgttccatgaatacaactagga 205
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18406 aggttcgatcggtcccaaaacaatagacaggacagcgttgttccatgaatacaactagga 18347

                                                                         
Query: 206   tgcgtacattcctcttcgat-gcntcgtttt-aagatcagtatttgcattttgtttctaa 263
             |||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||
Sbjct: 18346 tgcgtacattcctcttcgattgcttcgtttttaagatcagtatttgcattttgtttctaa 18287

                                                                         
Query: 264   acataatgcatatatcatgggatttggtaatacagtgcgtttcggtagaatttaccccag 323
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18286 acataatgcatatatcatgggatttggtaatacagtgcgtttcggtagaatttaccccag 18227

                                                                         
Query: 324   tgaatccattttgcgcagttttcgtcaaaccttttcgccagaagtatcgtaatcagtacc 383
             ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 18226 tgaatccattttgcgcagttttcgtcaaaccttttcgccagaagt-tcgtaatcagtacc 18168

                                                                         
Query: 384   gtaattgccataaaactcaataaagaagcaatattgccattttctttctgattgcacttg 443
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18167 gtaattgccataaaactcaataaagaagcaatattgccattttctttctgattgcacttg 18108

                                                                         
Query: 444   attatggaatggtctcgaactgattgagcacatattcaacttatactccctcaagacatt 503
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18107 attatggaatggtctcgaactgattgagcacatattcaacttatactccctcaagacatt 18048

                                                                         
Query: 504   taatacatctattaaggaacctggatcatcttgatttatcacgaaggtgacaaagtttac 563
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18047 taatacatctattaaggaacctggatcatcttgatttatcacgaaggtgacaaagtttac 17988

                                                                         
Query: 564   tttcatttcatcgcctttaggtgggagagcttggctgccaatttcgctagattcgtcacg 623
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17987 tttcatttcatcgcctttaggtgggagagcttggctgccaatttcgctagattcgtcacg 17928

                                                                         
Query: 624   ccttttcaagatcaagaaccttgtcgtatttccattgacatcattgataccgccttccac 683
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17927 ccttttcaagatcaagaaccttgtcgtatttccattgacatcattgataccgccttccac 17868

                                                                         
Query: 684   aatcgtagctttatttagtgatgcactcgcacggcttccaattgctagagttatttttct 743
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17867 aatcgtagctttatttagtgatgcactcgcacggcttccaattgctagagttatttttct 17808

                                                                         
Query: 744   atcagtggcatattcagctatgcatctttccacagccccccgcagtcgaactgcattcga 803
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 17807 atcagtggcatattcagctatgcatctttccacag-cccccgcagtcgaactgcagtcga 17749

                                                                         
Query: 804   tcttggcggtcttacccgnattttgtttcaagatcactgagatagtcttttacttggccc 863
             |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 17748 tcttggcggtctta-ccgtattttgtttcaagatcactgagatagtcttttacttggccc 17690

                                                                         
Query: 864   caaacttgtgggatgtgaatatataccatcaaccctttcttattgnttcttctgacagcg 923
             ||||||||| ||||||||||||||| |||||| ||||||||| |  ||||||||| ||||
Sbjct: 17689 caaacttgt-ggatgtgaatatataacatcaa-cctttcttaattgttcttctgagagcg 17632

                                            
Query: 924   gtactgttgaaatcaaacagtgggcattgtc 954
             |||||| ||||||||| || |||||| ||||
Sbjct: 17631 gtactggtgaaatcaagcaatgggcaatgtc 17601


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6249
Number of Sequences: 1807
Number of extensions: 6249
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 1016
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1000
effective length of database: 10,329,639
effective search space: 10329639000
effective search space used: 10329639000
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)