BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC1ZC05FM1.SCF screened BAC_end
         (1031 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1245                                                        1600   0.0  

>3x_Contig1245 
          Length = 6017

 Score = 1600 bits (807), Expect = 0.0
 Identities = 870/886 (98%), Gaps = 4/886 (0%)
 Strand = Plus / Plus

                                                                        
Query: 85   cttttgagcagtatgcaacggctatagacgtggtagtagcacaaatcggaatcttatttt 144
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4463 cttttgagcagtatgcaacggctatagacgtggtagtagcacaaatcggaatcttatttt 4522

                                                                        
Query: 145  ttcatgcaagaagccaaacgaaaaagtgggacatatgcagtcgaatgaccaacaaaaaca 204
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4523 ttcatgcaagaagccaaacgaaaaagtgggacatatgcagtcgaatgaccaacaaaaaca 4582

                                                                        
Query: 205  cggaaaccagaaagaggatcattcagaccatataaggcaaggtgagagacaatcgattac 264
            |||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||
Sbjct: 4583 cggaaaccagaaagaggaacaaacagaccatataaggcaaggtgagagacaatcgattac 4642

                                                                        
Query: 265  ataataagcgttcacgtgtgtagagaatttcaaaggtacaacagaaatgaccaatagtgc 324
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4643 ataataagcgttcacgtgtgtagagaatttcaaaggtacaacagaaatgaccaatagtgc 4702

                                                                        
Query: 325  tccaaacttgttctaaacgaaaagacgtttcaaacgatctgaccatagaaaagaagttca 384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4703 tccaaacttgttctaaacgaaaagacgtttcaaacgatctgaccatagaaaagaagttca 4762

                                                                        
Query: 385  agtggcgactattctcccacaacttcaggtacctccggacagaagttggtaaaaaattgt 444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4763 agtggcgactattctcccacaacttcaggtacctccggacagaagttggtaaaaaattgt 4822

                                                                        
Query: 445  cagctatctgcaatgaacgatcatagtgagatttcgtagtagcacgcactagtatgtgtt 504
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4823 cagctatctgcaatgaacgatcatagtgagatttcgtagtagcacgcactagtatgtgtt 4882

                                                                        
Query: 505  cttcttttttttgctgttggtaccaacggaatatacactctttccgggtataccacttca 564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4883 cttcttttttttgctgttggtaccaacggaatatacactctttccgggtataccacttca 4942

                                                                        
Query: 565  cggtttcgccctacggttcccttgacatttggatttaccctaactccggaagttgtgatg 624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4943 cggtttcgccctacggttcccttgacatttggatttaccctaactccggaagttgtgatg 5002

                                                                        
Query: 625  tgaattatgatagcgccttcggcttacatcctgtcatcatgctggtaatactagcaatgc 684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5003 tgaattatgatagcgccttcggcttacatcctgtcatcatgctggtaatactagcaatgc 5062

                                                                        
Query: 685  ttccttcttttttttcttgaagagccattgatgaccccgtgcaacgcgtacattttttat 744
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5063 ttccttcttttttttcttgaagagccattgatgaccccgtgcaacgcgtacattttttat 5122

                                                                        
Query: 745  ggaaaa-taaaagatgg-aaatcggaaatgt-atcggtgcatgattaagcaatgataatg 801
            |||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 5123 ggaaaattaaaagatggaaaatcgg-aatgtaatcggtgcatgattaagcaatgataatg 5181

                                                                        
Query: 802  agctacagcattgaacaaagaaagaggggtcangaagatggatttgcgtgtacgttacgg 861
            |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 5182 agctacagcattgaacaaagaaagagggttcaagaagatggatttgcgtgtacgttacgg 5241

                                                                        
Query: 862  cttctgatattctttcaaagcccctgccagaagtaggaatgggttacatctagatagcga 921
            |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 5242 cttctgatattctttcaaagcccctgccagaagtaggaatggtttacatcaagatagcga 5301

                                                          
Query: 922  ggtagctcggatttagggttcgaattttctgcgggtgacgtatatg 967
            ||||||||| ||||||| |  ||||||||||||| |||||||||||
Sbjct: 5302 ggtagctcgaatttaggttcggaattttctgcggttgacgtatatg 5347


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7746
Number of Sequences: 1807
Number of extensions: 7746
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 1031
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1015
effective length of database: 10,329,639
effective search space: 10484583585
effective search space used: 10484583585
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)