BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC1ZC10FM1.SCF screened BAC_end
         (1057 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1636                                                         821   0.0  

>3x_Contig1636 
          Length = 15667

 Score =  821 bits (414), Expect = 0.0
 Identities = 458/470 (97%), Gaps = 2/470 (0%)
 Strand = Plus / Plus

                                                                        
Query: 88   cgcaccggcgtgtagaagtggattgaatttttcgaaaactacgtcctcatcatcatcttc 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4163 cgcaccggcgtgtagaagtggattgaatttttcgaaaactacgtcctcatcatcatcttc 4222

                                                                        
Query: 148  ttcctcgttttcgatatcttcaccaacagccaatgatagatttatttgctctctaacagg 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4223 ttcctcgttttcgatatcttcaccaacagccaatgatagatttatttgctctctaacagg 4282

                                                                        
Query: 208  ttcaccttccaaatatccattatgtaagtacctatgtgttctcaagacatgttcactgat 267
            |||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 4283 ttcaccttccaaatatccaggaggtaagtacctatgtgttctcaagacatgttcactgat 4342

                                                                        
Query: 268  agctctatctctgatgtcgttgatatcatccgtaaccacaaatagtaaatcgaaacgaga 327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4343 agctctatctctgatgtcgttgatatcatccgtaaccacaaatagtaaatcgaaacgaga 4402

                                                                        
Query: 328  taatagagaatccggtagggcaatatttttatgtggatctttgttaacgtcatattgacc 387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4403 taatagagaatccggtagggcaatatttttatgtggatctttgttaacgtcatattgacc 4462

                                                                        
Query: 388  gaaaacagggtttgcagctgcgataactgaacaacgagcattcaatgttgtatgtatacc 447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4463 gaaaacagggtttgcagctgcgataactgaacaacgagcattcaatgttgtatgtatacc 4522

                                                                        
Query: 448  agcctttgcgattgttactgttttgttggtccataacttcatggatagcaactttattta 507
            |||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| ||
Sbjct: 4523 agcctttgcgattgttactg-tttgttgttccataacttcatggatagcaactctatcta 4581

                                                              
Query: 508  cgtcggacattttgtcaaactc-tcgataccaacgataccccgatttgcc 556
            |||||||||| ||||||||||| ||||||| ||||||||| |||| ||||
Sbjct: 4582 cgtcggacatcttgtcaaactcatcgatacaaacgataccacgatctgcc 4631


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9024
Number of Sequences: 1807
Number of extensions: 9024
Number of successful extensions: 128
Number of sequences better than 1.0e-20: 1
length of query: 1057
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1041
effective length of database: 10,329,639
effective search space: 10753154199
effective search space used: 10753154199
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)