BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZC10FM1.SCF screened BAC_end (1057 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1636 821 0.0 >3x_Contig1636 Length = 15667 Score = 821 bits (414), Expect = 0.0 Identities = 458/470 (97%), Gaps = 2/470 (0%) Strand = Plus / Plus Query: 88 cgcaccggcgtgtagaagtggattgaatttttcgaaaactacgtcctcatcatcatcttc 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4163 cgcaccggcgtgtagaagtggattgaatttttcgaaaactacgtcctcatcatcatcttc 4222 Query: 148 ttcctcgttttcgatatcttcaccaacagccaatgatagatttatttgctctctaacagg 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4223 ttcctcgttttcgatatcttcaccaacagccaatgatagatttatttgctctctaacagg 4282 Query: 208 ttcaccttccaaatatccattatgtaagtacctatgtgttctcaagacatgttcactgat 267 ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 4283 ttcaccttccaaatatccaggaggtaagtacctatgtgttctcaagacatgttcactgat 4342 Query: 268 agctctatctctgatgtcgttgatatcatccgtaaccacaaatagtaaatcgaaacgaga 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4343 agctctatctctgatgtcgttgatatcatccgtaaccacaaatagtaaatcgaaacgaga 4402 Query: 328 taatagagaatccggtagggcaatatttttatgtggatctttgttaacgtcatattgacc 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4403 taatagagaatccggtagggcaatatttttatgtggatctttgttaacgtcatattgacc 4462 Query: 388 gaaaacagggtttgcagctgcgataactgaacaacgagcattcaatgttgtatgtatacc 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4463 gaaaacagggtttgcagctgcgataactgaacaacgagcattcaatgttgtatgtatacc 4522 Query: 448 agcctttgcgattgttactgttttgttggtccataacttcatggatagcaactttattta 507 |||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| || Sbjct: 4523 agcctttgcgattgttactg-tttgttgttccataacttcatggatagcaactctatcta 4581 Query: 508 cgtcggacattttgtcaaactc-tcgataccaacgataccccgatttgcc 556 |||||||||| ||||||||||| ||||||| ||||||||| |||| |||| Sbjct: 4582 cgtcggacatcttgtcaaactcatcgatacaaacgataccacgatctgcc 4631 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9024 Number of Sequences: 1807 Number of extensions: 9024 Number of successful extensions: 128 Number of sequences better than 1.0e-20: 1 length of query: 1057 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1041 effective length of database: 10,329,639 effective search space: 10753154199 effective search space used: 10753154199 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)