BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZD02RM1.SCF screened BAC_end (983 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1724 894 0.0 >3x_Contig1724 Length = 20938 Score = 894 bits (451), Expect = 0.0 Identities = 533/554 (96%), Gaps = 5/554 (0%) Strand = Plus / Minus Query: 43 cttcgagatgctttagtacagaagaa-caactcgaagccaagtggaatagtttagagcaa 101 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 11080 cttcgagatgctttagtacagaagaaacaactcgaagccaagtggaatagtttagagcaa 11021 Query: 102 gaggtatacgataaagaaacagagtatctatcacagaaaccatcttccagaatggggaac 161 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11020 gaggtatacgataaagaaacagagtatctatcacagaaaccatcttccagaatggggaac 10961 Query: 162 attctgctcgggtttcagggtttcaacaagagcagttctgcgcagcagatattgtctgac 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10960 attctgctcgggtttcagggtttcaacaagagcagttctgcgcagcagatattgtctgac 10901 Query: 222 ctttcacattcgtcaaatgcccagccattggacgataatgatcgcattttttcattaagt 281 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10900 cactcacattcgtcaaatgcccagccattggacgataatgatcgcattttttcattaagt 10841 Query: 282 tcgtacctttttgcaaaacaattggctgcttccaatcatcaagaacaaacgaagtccaat 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10840 tcgtacctttttgcaaaacaattggctgcttccaatcatcaagaacaaacgaagtccaat 10781 Query: 342 gattgaacaggaagcttatctgtttgccctcttcactgagacatatccaggtccaggaca 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10780 gattgaacaggaagcttatctgtttgccctcttcactgagacatatccaggtccaggaca 10721 Query: 402 ccggacacaagagacaagagacaagagacaagagaaactaagggaggggggaagaaaaac 461 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 10720 ccggacacaagagacaagagacaagagacaagagaaactaaggga-gggggaagaaaaac 10662 Query: 462 ggtattattttaccccgcatttatttttcttgaagcacttctttaatgctcgngaaaatt 521 |||||||||||||||||||| ||||| |||||||||||| || |||||||| || |||| Sbjct: 10661 ggtattattttaccccgcatctatttctcttgaagcactctttaaatgctcgtgataatt 10602 Query: 522 aatcactttgt-acaatttggattctcttctcct-aaggattttcaattactaaccctt- 578 ||||||||||| ||| | || ||||||| |||| ||| ||||||||||||| |||||| Sbjct: 10601 aatcactttgtaacattatgtattctctcttcctaaagtattttcaattacttaccctta 10542 Query: 579 atttttgagaggcc 592 |||||||||||||| Sbjct: 10541 atttttgagaggcc 10528 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9137 Number of Sequences: 1807 Number of extensions: 9137 Number of successful extensions: 55 Number of sequences better than 1.0e-20: 1 length of query: 983 length of database: 10,358,551 effective HSP length: 16 effective length of query: 967 effective length of database: 10,329,639 effective search space: 9988760913 effective search space used: 9988760913 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)