BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC1ZD06FM1.SCF screened BAC_end
         (1009 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1698                                                        1394   0.0  

>3x_Contig1698 
          Length = 21001

 Score = 1394 bits (703), Expect = 0.0
 Identities = 785/808 (97%), Gaps = 4/808 (0%)
 Strand = Plus / Minus

                                                                         
Query: 88    ttcttatacatcacaaaataccttgctgaaaaaccagtgttatctgagagctttgcaaag 147
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12241 ttcttatacatcacaaaataccttgctgaaaaaccagtgttatctgagagctttgcaaag 12182

                                                                         
Query: 148   attcttgaaacaactaagaagtttatgactaaatcatctgcagatttgtggaaattagtg 207
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12181 attcttgaaacaactaagaagtttatgactaaatcatctgcagatttgtggaaattagtg 12122

                                                                         
Query: 208   aagccatccattcttaatgtttagttagaggtagtttcttcaagcatctgggttaagaat 267
             |||||||||||||||||||   || |||||||||||||||||||||||||||||||||||
Sbjct: 12121 aagccatccattcttaatgcccagctagaggtagtttcttcaagcatctgggttaagaat 12062

                                                                         
Query: 268   gatgttttaatggagtactataatgtgctgttgctgaaagccgataaatcatctgtcaac 327
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12061 gatgttttaatggagtactataatgtgctgttgctgaaagccgataaatcatctgtcaac 12002

                                                                         
Query: 328   tcgaatcagatattacagctacttttaaacaacgattctcttgtttatttgaatgaaaag 387
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12001 tcgaatcagatattacagctacttttaaacaacgattctcttgtttatttgaatgaaaag 11942

                                                                         
Query: 388   ggctccaaatatagtaaacttttaactacttcagctctctatcaattattcttcatggac 447
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11941 ggctccaaatatagtaaacttttaactacttcagctctctatcaattattcttcatggac 11882

                                                                         
Query: 448   gttaccgaaaattcaaacattgccctacaaaataaacttttagaattctacagcggatcg 507
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11881 gttaccgaaaattcaaacattgccctacaaaataaacttttagaattctacagcggatcg 11822

                                                                         
Query: 508   ataactacatcagacattcttttgctatccatgttggacaaaatggaatccattgtcgga 567
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11821 ataactacatcagacattcttttgctatccatgttggacaaaatggaatccattgtcgga 11762

                                                                         
Query: 568   caatcatggactaacgagatagtgagttgggaatttgttgattctcttcgcgagattgaa 627
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11761 caatcatggactaacgagatagtgagttgggaatttgttgattctcttcgcgagattgaa 11702

                                                                         
Query: 628   attgaattaattgggccttttaagttgataacanaggagaaagaagggttggttgttacc 687
             |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| 
Sbjct: 11701 attgaattaattgggcctttaaagttgataacaaaggagaaagaagggttggttgttaca 11642

                                                                         
Query: 688   attagtatgaatgatatatcanacactttgnataatttttccttcgcatcgcccaaggcc 747
             ||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||
Sbjct: 11641 attagtatgaatgatatatcaaacactttgaataa-ttttccttcgcatcgcccaaggcc 11583

                                                                         
Query: 748   cgattcgttccaaactggtacaacagaaagaaaatgggacaaactccaaaacctgtacag 807
             ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||| 
Sbjct: 11582 cgattcgttccaaactggtacaacagaagaaaaatggaacaaactccaaaacctgtacaa 11523

                                                                         
Query: 808   gggcggagttgcttctttgggagaaaatcattctact-tatacgatccattg-ttggtat 865
             ||  | ||||||||||||||||||||||||||||||| |||||||||||||| ||| |||
Sbjct: 11522 ggcggaagttgcttctttgggagaaaatcattctactatatacgatccattgtttgttat 11463

                                         
Query: 866   gctatg-ttgggtaattgggacgagttc 892
             |||||| |||| |||||| |||||||||
Sbjct: 11462 gctatgtttggttaattgtgacgagttc 11435


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7211
Number of Sequences: 1807
Number of extensions: 7211
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 1009
length of database: 10,358,551
effective HSP length: 16
effective length of query: 993
effective length of database: 10,329,639
effective search space: 10257331527
effective search space used: 10257331527
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)