BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZD06FM1.SCF screened BAC_end (1009 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1698 1394 0.0 >3x_Contig1698 Length = 21001 Score = 1394 bits (703), Expect = 0.0 Identities = 785/808 (97%), Gaps = 4/808 (0%) Strand = Plus / Minus Query: 88 ttcttatacatcacaaaataccttgctgaaaaaccagtgttatctgagagctttgcaaag 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12241 ttcttatacatcacaaaataccttgctgaaaaaccagtgttatctgagagctttgcaaag 12182 Query: 148 attcttgaaacaactaagaagtttatgactaaatcatctgcagatttgtggaaattagtg 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12181 attcttgaaacaactaagaagtttatgactaaatcatctgcagatttgtggaaattagtg 12122 Query: 208 aagccatccattcttaatgtttagttagaggtagtttcttcaagcatctgggttaagaat 267 ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 12121 aagccatccattcttaatgcccagctagaggtagtttcttcaagcatctgggttaagaat 12062 Query: 268 gatgttttaatggagtactataatgtgctgttgctgaaagccgataaatcatctgtcaac 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12061 gatgttttaatggagtactataatgtgctgttgctgaaagccgataaatcatctgtcaac 12002 Query: 328 tcgaatcagatattacagctacttttaaacaacgattctcttgtttatttgaatgaaaag 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12001 tcgaatcagatattacagctacttttaaacaacgattctcttgtttatttgaatgaaaag 11942 Query: 388 ggctccaaatatagtaaacttttaactacttcagctctctatcaattattcttcatggac 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11941 ggctccaaatatagtaaacttttaactacttcagctctctatcaattattcttcatggac 11882 Query: 448 gttaccgaaaattcaaacattgccctacaaaataaacttttagaattctacagcggatcg 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11881 gttaccgaaaattcaaacattgccctacaaaataaacttttagaattctacagcggatcg 11822 Query: 508 ataactacatcagacattcttttgctatccatgttggacaaaatggaatccattgtcgga 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11821 ataactacatcagacattcttttgctatccatgttggacaaaatggaatccattgtcgga 11762 Query: 568 caatcatggactaacgagatagtgagttgggaatttgttgattctcttcgcgagattgaa 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11761 caatcatggactaacgagatagtgagttgggaatttgttgattctcttcgcgagattgaa 11702 Query: 628 attgaattaattgggccttttaagttgataacanaggagaaagaagggttggttgttacc 687 |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 11701 attgaattaattgggcctttaaagttgataacaaaggagaaagaagggttggttgttaca 11642 Query: 688 attagtatgaatgatatatcanacactttgnataatttttccttcgcatcgcccaaggcc 747 ||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||| Sbjct: 11641 attagtatgaatgatatatcaaacactttgaataa-ttttccttcgcatcgcccaaggcc 11583 Query: 748 cgattcgttccaaactggtacaacagaaagaaaatgggacaaactccaaaacctgtacag 807 |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 11582 cgattcgttccaaactggtacaacagaagaaaaatggaacaaactccaaaacctgtacaa 11523 Query: 808 gggcggagttgcttctttgggagaaaatcattctact-tatacgatccattg-ttggtat 865 || | ||||||||||||||||||||||||||||||| |||||||||||||| ||| ||| Sbjct: 11522 ggcggaagttgcttctttgggagaaaatcattctactatatacgatccattgtttgttat 11463 Query: 866 gctatg-ttgggtaattgggacgagttc 892 |||||| |||| |||||| ||||||||| Sbjct: 11462 gctatgtttggttaattgtgacgagttc 11435 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7211 Number of Sequences: 1807 Number of extensions: 7211 Number of successful extensions: 41 Number of sequences better than 1.0e-20: 1 length of query: 1009 length of database: 10,358,551 effective HSP length: 16 effective length of query: 993 effective length of database: 10,329,639 effective search space: 10257331527 effective search space used: 10257331527 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)