BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZD07RM1.SCF screened BAC_end (974 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1630 1045 0.0 >3x_Contig1630 Length = 14771 Score = 1045 bits (527), Expect = 0.0 Identities = 625/649 (96%), Gaps = 8/649 (1%) Strand = Plus / Plus Query: 48 ttctctgagcagaattaggtttctttggcttcaataccatcactcttagcacaactcctt 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5372 ttctctgagcagaattaggtttctttggcttcaataccatcactcttagcacaactcctt 5431 Query: 108 tacgaatcgggcatacctccaaatctggggattcagtgatcttcttacggccaggaggct 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5432 tacgaatcgggcatacctccaaatctggggattcagtgatcttcttacggccaggaggct 5491 Query: 168 tgacccctctctttatttggttcaacgtggcttgtattggtgaagtatatgagaaagaac 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5492 tgacccctctctttatttggttcaacgtggcttgtattggtgaagtatatgagaaagaac 5551 Query: 228 gttgttgcagtggtggtgcaaatgctatgcttgaacgaacattacgcaacgatagtctag 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5552 gttgttgcagtggtggtgcaaatgctatgcttgaacgaacattacgcaacgatagtctag 5611 Query: 288 tcagactactgctcaatccgaaaacctgtttgaacattggtatctttgacaggattgttt 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5612 tcagactactgctcaatccgaaaacctgtttgaacattggtatctttgacaggattgttt 5671 Query: 348 cttaagatccagtgcacgtaagtcaaactcagagttgaacttacgccaacatttattcac 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5672 cttaagatccagtgcacgtaagtcaaactcagagttgaacttacgccaacatttattcac 5731 Query: 408 tgaccgattgatataactctttcaattcaacatttgcttcataattttttgtcagtttct 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5732 tgaccgattgatataactctttcaattcaacatttgcttcataattttttgtcagtttct 5791 Query: 468 gatgatgaaaaatcatagttgaaaatatttcgaagtcatgtgatcgaatatgtgttgttg 527 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 5792 gatgatgaaaaatcatagttgaaaatattcggaagtcatgtgatcgaatatgtgttgttg 5851 Query: 528 ctgatgtccgggaaa-tgttcagaaaattgccttggtttgagagatcttt--aacttana 584 ||||||||||||||| |||||||||||| | ||||||||||||||||| | || | | Sbjct: 5852 ctgatgtccgggaaattgttcagaaaatgtgcatggtttgagagatcttttaacctaaaa 5911 Query: 585 gattttgtt-attttgttgggaa-accagttgcactatgcggtttccgaattacaagaaa 642 ||||||||| |||| |||||||| ||||| |||||||||||| ||||||||||| ||||| Sbjct: 5912 gattttgttcatttcgttgggaacaccagctgcactatgcgggttccgaattacgagaaa 5971 Query: 643 ag-ccttactgaagaagttgttggattt-ctattttg-aatatcaaaca 688 || ||||||||| | |||||||| |||| |||||||| ||||||||||| Sbjct: 5972 agtccttactgaggtagttgttgtatttcctattttgaaatatcaaaca 6020 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8593 Number of Sequences: 1807 Number of extensions: 8593 Number of successful extensions: 130 Number of sequences better than 1.0e-20: 1 length of query: 974 length of database: 10,358,551 effective HSP length: 16 effective length of query: 958 effective length of database: 10,329,639 effective search space: 9895794162 effective search space used: 9895794162 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)