BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZD08FM1.SCF screened BAC_end (1006 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1640 1003 0.0 >3x_Contig1640 Length = 15521 Score = 1003 bits (506), Expect = 0.0 Identities = 581/602 (96%), Gaps = 3/602 (0%) Strand = Plus / Plus Query: 87 tttgaagccgcaagatgagaagtataatacttccctttacttagagtcagacgcagactg 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7952 tttgaagccgcaagatgagaagtataatacttccctttacttagagtcagacgcagactg 8011 Query: 147 tcaagtgttacttcagattccctttactgcatctgttaaaatatttgcaattatattacg 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8012 tcaagtgttacttcagattccctttactgcatctgttaaaatatttgcaattatattacg 8071 Query: 207 agttaacaagggtggatcatgttatattacaccaagacacattcagttgtataagaacta 266 ||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||| Sbjct: 8072 agttaacaagggtggatcagggtatagtacaccaagacacattcagttgtataagaacta 8131 Query: 267 caataagaatttggactttgataccataaacgatctgaaggcggagtacaccgtcgagtt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8132 caataagaatttggactttgataccataaacgatctgaaggcggagtacaccgtcgagtt 8191 Query: 327 tccagacaacgtcggtattgaaccagattataataatgaatcattatttgatgatgacac 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8192 tccagacaacgtcggtattgaaccagattataataatgaatcattatttgatgatgacac 8251 Query: 387 atttatcaagtttgacttgccaaggaatatcttccagaattgtgagaacttgactgtctt 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8252 atttatcaagtttgacttgccaaggaatatcttccagaattgtgagaacttgactgtctt 8311 Query: 447 agtgaaggataactggtcgggtgatgaggatgaccttaatagattatatttctgtgagtt 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8312 agtgaaggataactggtcgggtgatgaggatgaccttaatagattatatttctgtgagtt 8371 Query: 507 aagaggtgaagcgacagggaaactaagaaattcaggagttccaattgttgcagtgtatga 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8372 aagaggtgaagcgacagggaaactaagaaattcaggagttccaattgttgcagtgtatga 8431 Query: 567 gggcgcttcgaaccctggtgatgtgaaatttggattcgcaaactattatttac-ccttgt 625 || ||| ||||||||| |||||||||| ||||| ||||||||||||| |||| ||| || Sbjct: 8432 ggcggctccgaaccctgctgatgtgaaa-ttggaatcgcaaactattaattacgcctcgt 8490 Query: 626 aaggggcagttttgttc-agaacaaaaaaaagtttgggtttgtaggaccaatcaacctaa 684 || |||||||| ||||| |||||||| ||||||||| | | ||| ||| ||||||||||| Sbjct: 8491 aaagggcagttctgttcaagaacaaagaaaagtttgtgatagtaagacaaatcaacctaa 8550 Query: 685 aa 686 || Sbjct: 8551 aa 8552 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7566 Number of Sequences: 1807 Number of extensions: 7566 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 1006 length of database: 10,358,551 effective HSP length: 16 effective length of query: 990 effective length of database: 10,329,639 effective search space: 10226342610 effective search space used: 10226342610 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)