BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZD11FM1.SCF screened BAC_end (985 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig304 1289 0.0 >3x_Contig304 Length = 1230 Score = 1289 bits (650), Expect = 0.0 Identities = 665/669 (99%), Gaps = 1/669 (0%) Strand = Plus / Plus Query: 88 tcacttctgtgtcgaagaggcatatgaccttaggaatggaaggtttgttgacgatgctaa 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79 tcacttctgtgtcgaagaggcatatgaccttaggaatggaaggtttgttgacgatgctaa 138 Query: 148 ggacaatttcatatttgatgattctcagatattacccttagatgaggtcgtagaacttgt 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 ggacaatttcatatttgatgattctcagatattacccttagatgaggtcgtagaacttgt 198 Query: 208 ccaaaacctcattgataaatacttgattccacacaacagagcggaacactcttggaaaag 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 ccaaaacctcattgataaatacttgattccacacaacagagcggaacactcttggaaaag 258 Query: 268 agcattggttgggcatggtatatcaggggatattagctggctagaatcgttggacataag 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 259 agcattggttgggcatggtatatcaggggatattagctggctagaatcgttggacataag 318 Query: 328 attaccgaataatgttcaaaccttggatacccaaaaattattcgagaatatgtacggaag 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 319 attaccgaataatgttcaaaccttggatacccaaaaattattcgagaatatgtacggaag 378 Query: 388 acaatcatcactcaagaggctactgaatttatgcagaataccacactcctaccttcataa 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 acaatcatcactcaagaggctactgaatttatgcagaataccacactcctaccttcataa 438 Query: 448 cgcggggaatgattcctactacactctacagttacttttgtcaatgtgcgatataggaac 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 cgcggggaatgattcctactacactctacagttacttttgtcaatgtgcgatataggaac 498 Query: 508 aagaatcaagttggatttggacaattggcatcatgtaagaagattagaggagaatttata 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 499 aagaatcaagttggatttggacaattggcatcatgtaagaagattagaggagaatttata 558 Query: 568 ttgtgtggagcagctcgaaaaacaagggaagcgtnaaagaaatcgtggaaacaatttctc 627 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 559 ttgtgtggagcagctcgaaaaacaagggaagcgtaaaagaaatcgtggaaacaatttctc 618 Query: 628 acaacgctaagaaatgcattttttctacaatattcgcgctgatattacagtatatagatg 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 619 acaacgctaagaaatgcattttttctacaatattcgcgctgatattacagtatatagatg 678 Query: 688 tgcatacgttatgctcatatatatattatattttgctgcccgtaatc-cagttcaccttt 746 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | || Sbjct: 679 tgcatacgttatgctcatatatatattatattttgctgcccgtaatcacagttcaacctt 738 Query: 747 tcttgtctc 755 ||||||||| Sbjct: 739 tcttgtctc 747 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7061 Number of Sequences: 1807 Number of extensions: 7061 Number of successful extensions: 67 Number of sequences better than 1.0e-20: 1 length of query: 985 length of database: 10,358,551 effective HSP length: 16 effective length of query: 969 effective length of database: 10,329,639 effective search space: 10009420191 effective search space used: 10009420191 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)