BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZE06RM1.SCF screened BAC_end (1000 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1224 1590 0.0 >3x_Contig1224 Length = 5948 Score = 1590 bits (802), Expect = 0.0 Identities = 919/945 (97%), Gaps = 12/945 (1%) Strand = Plus / Plus Query: 40 ctttgaagtccaaatcacgaaccataagccgactgaacataaatttgcatctgaagagtc 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3891 ctttgaagtccaaatcacgaaccataagccgactgaacataaatttgcatctgaagagtc 3950 Query: 100 aaattgactccagttttcagtgaaagggttgatactatcacaagaacctacattactgtt 159 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3951 aaattgactccagttttcagtgaaagggttgatactatcacaagaacctacattactgtt 4010 Query: 160 caaattccagtcagtactgttgcatccgcctattcggctaccagtaccgaaatcaggact 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4011 caaattccagtcagtactgttgcatccgcctattcggctaccagtaccgaaatcaggact 4070 Query: 220 attaatacctcttgttttaggtgaatatgctcgtgtaatgtaacagaatatggtgtcgat 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4071 attaatacctcttgttttaggtgaatatgctcgtgtaatgtaacagaatatggtgtcgat 4130 Query: 280 tttggataatggtacaatagatagaaaaattgttgttacaatggacactgtcaatgaaat 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4131 tttggataatggtacaatagatagaaaaattgttgttacaatggacactgtcaatgaaat 4190 Query: 340 aaatgaaattatagtcaaaatattctcattaataagtcttttcctcgatatatgaaaaag 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4191 aaatgaaattatagtcaaaatattctcattaataagtcttttcctcgatatatgaaaaag 4250 Query: 400 cgacaaaatacctgatggcggtattatgtttaaaagaagcatgaaaattagtataaataa 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4251 cgacaaaatacctgatggcggtattatgtttaaaagaagcatgaaaattagtataaataa 4310 Query: 460 tcttgattttgtgggttttcggagatttgaatcgcgtgggacaaaaaacatttcaccaat 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4311 tcttgattttgtgggttttcggagatttgaatcgcgtgggacaaaaaacatttcaccaat 4370 Query: 520 aatcgcagatatggtaatcaagcacgagaatgtacctgccaacgacataactgagaataa 579 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4371 aatcgcagatatggtaatcaagcacgagaatgtacctgccaacgacataactgagaataa 4430 Query: 580 aacgaataactcagggtcattgtccaaagtttgtatataatgttttgtgaacaacggttt 639 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4431 aacgaataactcagggtcattgtccaaagtttgtatataatgttttgtgaacaacggttt 4490 Query: 640 taggtttat-acagaaaaataccaaaaagtggcaacgtgaatggtccaaattctatggaa 698 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4491 taggtttatcacagaaaaataccaaaaagtggcaacgtgaatggtccaaattctatggaa 4550 Query: 699 attcgtgatcaaatggtaccaagtacgtgattcaatataggttttccgtaaggattttga 758 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4551 attcgtgatcaaatggtaccaagtacgtgattcaatataggttttccgtaaggattttga 4610 Query: 759 ccattcaatctgtgtgaactttagatatttcatatcccgcggtagatcggcatangtggt 818 ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 4611 ccattcaatctgtgtgaacttagaatatttcatatcccgcggtagatcggcatagttggt 4670 Query: 819 acccatctttca-tttaaactggttaatggnttttaatgaccagaaacaatgat--atat 875 ||| |||||||| ||||||||||||||||| |||||||||||||||||| |||| |||| Sbjct: 4671 acc-atctttcaatttaaactggttaatggtttttaatgaccagaaacattgattaatat 4729 Query: 876 cgncgnatcctata-tatgggaaatgtcggtactttatttcca-gttatt-gaaat-gac 931 || || |||||||| |||||||| |||| |||||| ||||| |||||| ||||| ||| Sbjct: 4730 cgtcgtatcctataatatgggaatggtcgttacttttattccaagttatttgaaattgac 4789 Query: 932 aaa-ttc-tataagggatta-caacgtgttggagaaaacaaggag 973 ||| ||| |||||||||||| |||||||||||||||||||||||| Sbjct: 4790 aaaattcatataagggattaacaacgtgttggagaaaacaaggag 4834 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7832 Number of Sequences: 1807 Number of extensions: 7832 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 1000 length of database: 10,358,551 effective HSP length: 16 effective length of query: 984 effective length of database: 10,329,639 effective search space: 10164364776 effective search space used: 10164364776 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)