BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZE12RM1.SCF screened BAC_end (1000 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig871 1540 0.0 >3x_Contig871 Length = 4172 Score = 1540 bits (777), Expect = 0.0 Identities = 895/922 (97%), Gaps = 10/922 (1%) Strand = Plus / Minus Query: 41 cttttgataggtgaatccagaacatcgtttacaagagtaggcgaaaataatctaacatgt 100 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2598 cttttgataggtgaatccagaacaacgtttacaagagtaggcgaaaataatctaacatgt 2539 Query: 101 atttcgtgttatcaaccctcagttaacaagttttctcataaagatgttcaaaataagagc 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2538 atttcgtgttatcaaccctcagttaacaagttttctcataaagatgttcaaaataagagc 2479 Query: 161 aaggacaaaatatttgcttacactgttagcaaggacatgcaattaacaaaatatgatgtt 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2478 aaggacaaaatatttgcttacactgttagcaaggacatgcaattaacaaaatatgatgtt 2419 Query: 221 actgatttcaaagctagaccaaaaaaagtgaaatatgttaaaggtggtagaaaatacata 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2418 actgatttcaaagctagaccaaaaaaagtgaaatatgttaaaggtggtagaaaatacata 2359 Query: 281 ccggaaggtaaatttgagtacgagaatgtgacagaaggtcattacgatgaaatcttaacg 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2358 ccggaaggtaaatttgagtacgagaatgtgacagaaggtcattacgatgaaatcttaacg 2299 Query: 341 gtggcagcttctcctgatggtaaatacgtagttagtggtggtcgtgaccgtaaactgata 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2298 gtggcagcttctcctgatggtaaatacgtagttagtggtggtcgtgaccgtaaactgata 2239 Query: 401 gtatggagtaccgaatctttagcccctgtgaaaattattccaaccaaagatcgtagaggt 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2238 gtatggagtaccgaatctttagcccctgtgaaaattattccaaccaaagatcgtagaggt 2179 Query: 461 gaggttttaggattagcattcaagaagaattcggatcaattattcgcagcatgtgccgat 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2178 gaggttttaggattagcattcaagaagaattcggatcaattattcgcagcatgtgccgat 2119 Query: 521 tacaaaatcagaacgtatgctattaaccagttttctcaactggaaatattatacggtcat 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2118 tacaaaatcagaacgtatgctattaaccagttttctcaactggaaatattatacggtcat 2059 Query: 581 caggatttggttattgatatctctgccct-aatatggagcgttgtgtgacagtggggtcc 639 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2058 caggatttggttattgatatctctgccctaaatatggagcgttgtgtgacagtggggtcc 1999 Query: 640 agggatcgtaccgctatgttgtggaanatagctgacgaatccagattgacattcagaggt 699 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1998 agggatcgtaccgctatgttgtggaaaatagctgacgaatccagattgacattcagaggt 1939 Query: 700 ggtgatgatcctgaaagactgangaaaaaatggttgaagaacc-acaattgtccgcagaa 758 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 1938 ggtgatgatcctgaaagactgaggaaaaaatggttgaagaaccaacaattgtccgcagaa 1879 Query: 759 agcggagaagatatgcatgaacagaccccacctcac-tttattgcgagggaagtatcgat 817 ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 1878 ggcggagaagatatgcatgaacagaccccacctcacttttatggcgagggaagtatcgat 1819 Query: 818 tgtatt-gcatggtagatgattcacatttcgttact-gcttttgttacgggaatatat-a 874 |||||| ||||||||||||||||||||||||||||| ||| | | |||| ||||||| | Sbjct: 1818 tgtattagcatggtagatgattcacatttcgttactggctctgataacggaaatatatca 1759 Query: 875 ttatgggtctttatcc-aaaagaaa-ctttttttaccgtttg-actgcttatgntgttgt 931 |||| ||||||||||| |||||||| || |||| |||||| | |||||| ||| |||||| Sbjct: 1758 ttat-ggtctttatccaaaaagaaacctcttttcaccgttagaactgctcatggtgttgt 1700 Query: 932 accattatttgagaataaaaaa 953 ||||||| ||||| |||||||| Sbjct: 1699 accattagttgaggataaaaaa 1678 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7553 Number of Sequences: 1807 Number of extensions: 7553 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 1000 length of database: 10,358,551 effective HSP length: 16 effective length of query: 984 effective length of database: 10,329,639 effective search space: 10164364776 effective search space used: 10164364776 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)