BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZF03RM1.SCF screened BAC_end (994 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1789 1146 0.0 >3x_Contig1789 Length = 30977 Score = 1146 bits (578), Expect = 0.0 Identities = 643/661 (97%), Gaps = 3/661 (0%) Strand = Plus / Plus Query: 50 acccattgaatcgtacgattgtatattgaggttctgttt-aatggtacgtttggtcccac 108 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 16212 acccattgaatcgtacgattgtatattgaggttctgtttcaatggtacgtttggtcccac 16271 Query: 109 aaatccattgccctgtgacaatctcaccctactgttccccatactgctattaacattttt 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16272 aaatccattgccctgtgacaatctcaccctactgttccccatactgctattaacattttt 16331 Query: 169 cttttgagacttatttggtgtgctttgtgagaaagacctatagttacgtgaatcgtgcct 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16332 cttttgagacttatttggtgtgctttgtgagaaagacctatagttacgtgaatcgtgcct 16391 Query: 229 actattctgttgttgatgattttgtccctgtacttgccccggtgcctgctgttgtgcctg 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16392 actattctgttgttgatgattttgtccctgtacttgccccggtgcctgctgttgtgcctg 16451 Query: 289 ctgttgatgcaatggtgtaagctgttgagcagaatgttttgtatttcttggtgttggatt 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16452 ctgttgatgcaatggtgtaagctgttgagcagaatgttttgtatttcttggtgttggatt 16511 Query: 349 accatacccatgcaaattaactcttttgttgaccttaatgttccaaccttgaccgccgtt 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16512 accatacccatgcaaattaactcttttgttgaccttaatgttccaaccttgaccgccgtt 16571 Query: 409 caaatccatccaatcgtaatgaccatcttcttcgtacccattttcttgcatgatttgcgt 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16572 caaatccatccaatcgtaatgaccatcttcttcgtacccattttcttgcatgatttgcgt 16631 Query: 469 catcaaggagatcaaataatcataatctgggtcctgatcgaaccttaacgatctacagta 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16632 catcaaggagatcaaataatcataatctgggtcctgatcgaaccttaacgatctacagta 16691 Query: 529 cgatagatattcagcanactgttttggtatcttcggtgtcaataaattcgttggttttaa 588 |||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 16692 cgatagatattcagcaaactgttttggtatctccggtgtcaataaatccgttggttttaa 16751 Query: 589 cctctgtttcgtgagttcaatcttttcatacttagcctttgtggttagagcttt-taacc 647 |||||||||||||||| |||||||||||||||||||||| || | |||||||| |||| Sbjct: 16752 cctctgtttcgtgagtccaatcttttcatacttagccttgttgttaagagctttcaaacc 16811 Query: 648 ttgccattgttaggacccacgttagaaat-taagaataccttgccaagggactccaagtc 706 ||||||| || ||||||||||| |||||| |||||||| | |||||||||||||||||| Sbjct: 16812 ttgccatggtaaggacccacgtaagaaatagaagaatacgtggccaagggactccaagtc 16871 Query: 707 a 707 | Sbjct: 16872 a 16872 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7010 Number of Sequences: 1807 Number of extensions: 7010 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 994 length of database: 10,358,551 effective HSP length: 16 effective length of query: 978 effective length of database: 10,329,639 effective search space: 10102386942 effective search space used: 10102386942 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)