BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZF06RM1.SCF screened BAC_end (990 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1648 1312 0.0 >3x_Contig1648 Length = 16375 Score = 1312 bits (662), Expect = 0.0 Identities = 709/720 (98%), Gaps = 4/720 (0%) Strand = Plus / Plus Query: 51 cttgtgactaagggcccagagaacacagaagaattaactaatgaagctaatgaattcaag 110 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8596 cttgtgactaagggcccagagaacacagaagaattaactaatgaagctaatgaattcaag 8655 Query: 111 attttttggggtaaaaaagcatctcttcgtagattcaaggacggttccattgcaaactgc 170 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8656 attttttggggtaaaaaagcatctcttcgtagattcaaggacggttccattgcaaactgc 8715 Query: 171 tgtgtctggtcaacttctgctattgaaagtgttgtttcttcgattttgtcctatgttcta 230 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8716 tgtgtctggtcaacttctgctattgaaagtgttgtttcttcgattttgtcctatgttcta 8775 Query: 231 aggctacatttgactgaagactgcaaactcatcaataattccactagccaattccaacag 290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8776 aggctacatttgactgaagactgcaaactcatcaataattccactagccaattccaacag 8835 Query: 291 ttgttaccactaccgaacctacctgcatcttcaaagacatcagttctaaacctatcaagc 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8836 ttgttaccactaccgaacctacctgcatcttcaaagacatcagttctaaacctatcaagc 8895 Query: 351 tactataacttgaagaagtcctttgacgatttgtataaaatcatgttcgagctaaaactc 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8896 tactataacttgaagaagtcctttgacgatttgtataaaatcatgttcgagctaaaactc 8955 Query: 411 ccattatcaattaaatctcttttacctattggttctgcattcaggtacacatcattatgt 470 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8956 ccattatcaattaaatctcttttacctattggttctgcattcaggtacacatcattatgt 9015 Query: 471 cagcctgtcccatacgcatattctaatcctgatttcttacaagacgttgttatcgaattc 530 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9016 cagcctgtcccatacgcatattctaatcctgatttcttacaagacgttgttatcgaattc 9075 Query: 531 gaaacgtctacaaaatggcctgacgaaattacttcgtttggaaaagctaaagctgcattt 590 |||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||| Sbjct: 9076 gaaacgtctacaaaatggcctgacgaaattacttcgttggaaaaggctaaagctgcattt 9135 Query: 591 ttattgaagattcaag-atccatcacgcagactcatagtgagtacaagtgctactttaca 649 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9136 ttattgaagattcaagaatccatcacgcagactcatagtgagtacaagtgctactttaca 9195 Query: 650 cgtgatgaatcgattccatacaactt-gaaatagttactctaaacattttgactccag-a 707 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 9196 cgtgatgaatcgattccatacaacttggaaatagttactctaaacattttgactccagaa 9255 Query: 708 ggatacngnttcaagtttagagttct-actgagagaaaccaagttatgtatttgagagca 766 |||||| | ||||||||||||||||| ||||||||| || |||||||||||||||||||| Sbjct: 9256 ggatacggtttcaagtttagagttctaactgagagagacgaagttatgtatttgagagca 9315 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7273 Number of Sequences: 1807 Number of extensions: 7273 Number of successful extensions: 45 Number of sequences better than 1.0e-20: 1 length of query: 990 length of database: 10,358,551 effective HSP length: 16 effective length of query: 974 effective length of database: 10,329,639 effective search space: 10061068386 effective search space used: 10061068386 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)