BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZF07FM1.SCF screened BAC_end (986 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1352 985 0.0 >3x_Contig1352 Length = 6660 Score = 985 bits (497), Expect = 0.0 Identities = 573/596 (96%), Gaps = 3/596 (0%) Strand = Plus / Minus Query: 88 ttgggcagtagttctactagcccttgaatcgagttgagtcaaaagatgaatatagacgtt 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1808 ttgggcagtagttctactagcccttgaatcgagttgagtcaaaagatgaatatagacgtt 1749 Query: 148 ttccttcgacgattgttggaatccaaactttctggttaaatcattgaagatgtctttgat 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1748 ttccttcgacgattgttggaatccaaactttctggttaaatcattgaagatgtctttgat 1689 Query: 208 ttcctgttttgtgactggcacttgttcgtcctgataccaagccggaaattcaatctctgt 267 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1688 ttcctgttttgtgactggcacttgctcgtcctgataccaagccggaaattcaatctctgt 1629 Query: 268 catagagacttgaggacttgtcattacgatattctcaactctgccaaagaatatatcgcc 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1628 catagagacttgaggacttgtcattacgatattctcaactctgccaaagaatatatcgcc 1569 Query: 328 gaattgagttcttatttggtcttttctgtgatgtttgatcttgttcttgtgagacagtat 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1568 gaattgagttcttatttggtcttttctgtgatgtttgatcttgttcttgtgagacagtat 1509 Query: 388 gttatctgaagtttcgtatctttagccgccaccccctagtttatatagtttggtacaacg 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1508 gttatctgaagtttcgtatctttagccgccaccccctagtttatatagtttggtacaacg 1449 Query: 448 gaaaaagacaaatataaatcacaaacacaaagcggcttgaaataatgtcagtcaaaattc 507 |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1448 gaaaaagaaaaatataaatcaaaaacacaaagcggcttgaaataatgtcagtcaaaattc 1389 Query: 508 ccacgtatgcgagggggcaactcatattcaatggggggaggggggaagaagatt-aattt 566 |||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||| Sbjct: 1388 ccacgtatgcgagggggcaactcaaattcaatggggggagggggga--gagattaaatta 1331 Query: 567 aaagcgttttttctcacgcgctattcaacagccccattccacgttaccgtgaataacttg 626 |||||||| || |||||||||| | |||||| ||||||||||| ||||||||||||| | Sbjct: 1330 aaagcgttattcctcacgcgctttcgaacagcaccattccacgtaaccgtgaataactcg 1271 Query: 627 attgacagcgcattggtctttgagcgttattaagcttatcgacagctgttttcctg 682 |||||| |||||||||||| |||| |||| |||||| | ||||||||||||||||| Sbjct: 1270 attgacggcgcattggtctctgagtgttagtaagctgagcgacagctgttttcctg 1215 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6657 Number of Sequences: 1807 Number of extensions: 6657 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 986 length of database: 10,358,551 effective HSP length: 16 effective length of query: 970 effective length of database: 10,329,639 effective search space: 10019749830 effective search space used: 10019749830 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)