BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZF09FM1.SCF screened BAC_end (1020 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1490 1386 0.0 >3x_Contig1490 Length = 9411 Score = 1386 bits (699), Expect = 0.0 Identities = 809/831 (97%), Gaps = 11/831 (1%) Strand = Plus / Plus Query: 88 tctcacaaggccattcacaaaattgttgatatcagaatcaaagacttggagaagcaattt 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3513 tctcacaaggccattcacaaaattgttgatatcagaatcaaagacttggagaagcaattt 3572 Query: 148 gcggataatgataagaattacaagatcaacgtttcaccaccagctcgggatttcttgacc 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3573 gcggataatgataagaattacaagatcaacgtttcaccaccagctcgggatttcttgacc 3632 Query: 208 aagaatggttactcggaggatattgtttgctaggccattgaacagattaattcaaaccga 267 ||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||| Sbjct: 3633 aagaatggttactcggaggatatgggt-gctaggccattgaacagattaattcaaaccga 3691 Query: 268 gattttgaacccaatggcaatccatatcttgaagggtgagatcaaagacaaagaaattgt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3692 gattttgaacccaatggcaatccatatcttgaagggtgagatcaaagacaaagaaattgt 3751 Query: 328 caatgtagaagtgggtgccgatggatctcatttagaagttttaccaaatcacccagcttc 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3752 caatgtagaagtgggtgccgatggatctcatttagaagttttaccaaatcacccagcttc 3811 Query: 388 atcagaaattggtgatgaagacatggatttggacttggacgacgatgacgacttagacct 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3812 atcagaaattggtgatgaagacatggatttggacttggacgacgatgacgacttagacct 3871 Query: 448 agactgatctaaaatgaattacaaaaagaaaacatacaaacaaactcactcagtaataaa 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3872 agactgatctaaaatgaattacaaaaagaaaacatacaaacaaactcactcagtaataaa 3931 Query: 508 atttcagttcaacagtaccatcatatatagtgtaaagtacatatttttttcactttcttt 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3932 atttcagttcaacagtaccatcatatatagtgtaaagtacatatttttttcactttcttt 3991 Query: 568 agtataatattttgacttttacatgttttcatgttcataagaggtgcaaaccaatggtgc 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3992 agtataatattttgacttttacatgttttcatgttcataagaggtgcaaaccaatggtgc 4051 Query: 628 tgctgttattcatacaagcgtactaactaagcattctggctgagtttgtattacatgtta 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4052 tgctgttattcatacaagcgtactaactaagcattctggctgagtttgtattacatgtta 4111 Query: 688 cttagatgggcaggggttcttcagcctttttcactgatttcccaagtcagtaagtccaat 747 ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4112 cttagatgggcagggttctttcagcctttttcactgatttcccaagtcagtaagtccaat 4171 Query: 748 tttgcacatgatttcaaagaaattgattggtctttctt-aaatcatgcttcttt-ctcac 805 ||||||||||||| |||||| |||||||||||||||| ||||||||||||||| ||||| Sbjct: 4172 tttgcacatgattcaaaagaatttgattggtctttcttcaaatcatgcttctttcctcac 4231 Query: 806 gaatg-taatcttcgg-tttttttctcttctt-cctcgttccgtggaggta-tgcctgag 861 ||||| |||||||||| |||||| |||||||| ||||||||||||||| || || ||||| Sbjct: 4232 gaatgttaatcttcggcttttttcctcttcttccctcgttccgtggagttattggctgag 4291 Query: 862 t-acat-ccatatacctttcgttct-ggcatcgct-aacatgcttggtaaa 908 | |||| |||||||||||||||||| ||||||||| ||||||||||||||| Sbjct: 4292 taacatcccatatacctttcgttctgggcatcgctaaacatgcttggtaaa 4342 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9107 Number of Sequences: 1807 Number of extensions: 9107 Number of successful extensions: 68 Number of sequences better than 1.0e-20: 1 length of query: 1020 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1004 effective length of database: 10,329,639 effective search space: 10370957556 effective search space used: 10370957556 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)