BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZF10FM1.SCF screened BAC_end (1015 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1739 1489 0.0 >3x_Contig1739 Length = 22061 Score = 1489 bits (751), Expect = 0.0 Identities = 783/790 (99%), Gaps = 3/790 (0%) Strand = Plus / Plus Query: 85 cagaacctggctttgtcattggtatcgaggctgatccggatagaagcgattgggcagagt 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 932 cagaacctggctttgtcattggtatcgaggctgatccggatagaagcgattgggcagagt 991 Query: 145 ggtacgccaggagaatacaattctgtcagtggacaatacaatcaaaatctggccatccat 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 992 ggtacgccaggagaatacaattctgtcagtggacaatacaatcaaaatctggccatccat 1051 Query: 205 tattgcgcgaattgatcatttatatcaccgcaacaacattggagagcgtggcaaatgtta 264 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1052 tattgcgcgaattgatcacaaatatcaccgcaacaacattggagagcgtggcaaatgtta 1111 Query: 265 aaagcagcattcctttagatgatgctgaagtattaaaagacattgcagatgattataatg 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1112 aaagcagcattcctttagatgatgctgaagtattaaaagacattgcagatgattataatg 1171 Query: 325 tcaacatgagggataaaaagaagttcaacaaaaattacaaacatcaacaaaagaaaaccg 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1172 tcaacatgagggataaaaagaagttcaacaaaaattacaaacatcaacaaaagaaaaccg 1231 Query: 385 ccaaaaatacagatggtaccgatattatgaactggactggtccaggtattttttcagatg 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1232 ccaaaaatacagatggtaccgatattatgaactggactggtccaggtattttttcagatg 1291 Query: 445 ttattttccagtatcttaataacgttatccagaagaatgatgacattttaattttcaatg 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1292 ttattttccagtatcttaataacgttatccagaagaatgatgacattttaattttcaatg 1351 Query: 505 ataatcttaatgttatcaacaaacatggatccaaacatgatacaactatgagattctata 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1352 ataatcttaatgttatcaacaaacatggatccaaacatgatacaactatgagattctata 1411 Query: 565 aagacattgttaaaaatttacaaaacgacaaaccctcattgttctggggattcttttcat 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1412 aagacattgttaaaaatttacaaaacgacaaaccctcattgttctggggattcttttcat 1471 Query: 625 tgatgacagagcctattctagtggacgacatcatggtacttccgattacttctttctcac 684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1472 tgatgacagagcctattctagtggacgacatcatggtacttccgattacttctttctcac 1531 Query: 685 caggtatcagaacaatgggcgctaaagaagacaacgacgagatggcatttgttaagcata 744 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1532 caggtatcagaacaatgggcgctaaagaagacaacgacgagatggcatttgttaagcata 1591 Query: 745 tttttgaaggaagttgg-aagactgaagatg-aagcaaaaagcgaactcagtgcaaagag 802 ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1592 tttttgaaggaagttggaaagactgaagatgaaagcaaaaagcgaactcagtgcaaagag 1651 Query: 803 acaaaataagcatattacttcattcatttcatttgngtatctttttttttttnttttttt 862 ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 1652 acaaaataagcatattacttcattcatttcatttgtgtatcttttttttttt-ttttttt 1710 Query: 863 tttcaacatt 872 |||||||||| Sbjct: 1711 tttcaacatt 1720 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,132 Number of Sequences: 1807 Number of extensions: 14132 Number of successful extensions: 1766 Number of sequences better than 1.0e-20: 1 length of query: 1015 length of database: 10,358,551 effective HSP length: 16 effective length of query: 999 effective length of database: 10,329,639 effective search space: 10319309361 effective search space used: 10319309361 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)