BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC1ZF10FM1.SCF screened BAC_end
         (1015 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1739                                                        1489   0.0  

>3x_Contig1739 
          Length = 22061

 Score = 1489 bits (751), Expect = 0.0
 Identities = 783/790 (99%), Gaps = 3/790 (0%)
 Strand = Plus / Plus

                                                                        
Query: 85   cagaacctggctttgtcattggtatcgaggctgatccggatagaagcgattgggcagagt 144
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932  cagaacctggctttgtcattggtatcgaggctgatccggatagaagcgattgggcagagt 991

                                                                        
Query: 145  ggtacgccaggagaatacaattctgtcagtggacaatacaatcaaaatctggccatccat 204
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 992  ggtacgccaggagaatacaattctgtcagtggacaatacaatcaaaatctggccatccat 1051

                                                                        
Query: 205  tattgcgcgaattgatcatttatatcaccgcaacaacattggagagcgtggcaaatgtta 264
            ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||
Sbjct: 1052 tattgcgcgaattgatcacaaatatcaccgcaacaacattggagagcgtggcaaatgtta 1111

                                                                        
Query: 265  aaagcagcattcctttagatgatgctgaagtattaaaagacattgcagatgattataatg 324
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1112 aaagcagcattcctttagatgatgctgaagtattaaaagacattgcagatgattataatg 1171

                                                                        
Query: 325  tcaacatgagggataaaaagaagttcaacaaaaattacaaacatcaacaaaagaaaaccg 384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1172 tcaacatgagggataaaaagaagttcaacaaaaattacaaacatcaacaaaagaaaaccg 1231

                                                                        
Query: 385  ccaaaaatacagatggtaccgatattatgaactggactggtccaggtattttttcagatg 444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1232 ccaaaaatacagatggtaccgatattatgaactggactggtccaggtattttttcagatg 1291

                                                                        
Query: 445  ttattttccagtatcttaataacgttatccagaagaatgatgacattttaattttcaatg 504
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1292 ttattttccagtatcttaataacgttatccagaagaatgatgacattttaattttcaatg 1351

                                                                        
Query: 505  ataatcttaatgttatcaacaaacatggatccaaacatgatacaactatgagattctata 564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1352 ataatcttaatgttatcaacaaacatggatccaaacatgatacaactatgagattctata 1411

                                                                        
Query: 565  aagacattgttaaaaatttacaaaacgacaaaccctcattgttctggggattcttttcat 624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1412 aagacattgttaaaaatttacaaaacgacaaaccctcattgttctggggattcttttcat 1471

                                                                        
Query: 625  tgatgacagagcctattctagtggacgacatcatggtacttccgattacttctttctcac 684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1472 tgatgacagagcctattctagtggacgacatcatggtacttccgattacttctttctcac 1531

                                                                        
Query: 685  caggtatcagaacaatgggcgctaaagaagacaacgacgagatggcatttgttaagcata 744
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1532 caggtatcagaacaatgggcgctaaagaagacaacgacgagatggcatttgttaagcata 1591

                                                                        
Query: 745  tttttgaaggaagttgg-aagactgaagatg-aagcaaaaagcgaactcagtgcaaagag 802
            ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1592 tttttgaaggaagttggaaagactgaagatgaaagcaaaaagcgaactcagtgcaaagag 1651

                                                                        
Query: 803  acaaaataagcatattacttcattcatttcatttgngtatctttttttttttnttttttt 862
            ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 1652 acaaaataagcatattacttcattcatttcatttgtgtatcttttttttttt-ttttttt 1710

                      
Query: 863  tttcaacatt 872
            ||||||||||
Sbjct: 1711 tttcaacatt 1720


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,132
Number of Sequences: 1807
Number of extensions: 14132
Number of successful extensions: 1766
Number of sequences better than 1.0e-20: 1
length of query: 1015
length of database: 10,358,551
effective HSP length: 16
effective length of query: 999
effective length of database: 10,329,639
effective search space: 10319309361
effective search space used: 10319309361
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)