BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZG04FM1.SCF screened BAC_end (1022 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1338 829 0.0 >3x_Contig1338 Length = 8134 Score = 829 bits (418), Expect = 0.0 Identities = 514/538 (95%), Gaps = 6/538 (1%) Strand = Plus / Minus Query: 89 taaattgtatgtaatagagattgatacttatacagtttcaacatgcttagatgttagatg 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5315 taaattgtatgtaatagagattgatacttatacagtttcaacatgcttagatgttagatg 5256 Query: 149 ggtacaagaagattctgacagaagcaccgaaagtcttagctggcaagttagatctgaatg 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5255 ggtacaagaagattctgacagaagcaccgaaagtcttagctggcaagttagatctgaatg 5196 Query: 209 tagctctaacgacaccttttttaccgtgtgttctgttgatcttaccccagataactctga 268 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 5195 tagctctaacgacaccggagttaccgtgtgttctgttgatcttaccccagataactctga 5136 Query: 269 tcttggaacctctgacttccttggagcatctgtagacataggcgactctcttacccaagt 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5135 tcttggaacctctgacttccttggagcatctgtagacataggcgactctcttacccaagt 5076 Query: 329 agaacttagcgtcttctgggttggcaacaccttcaatcttgaccaaagagacgtttgggt 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5075 agaacttagcgtcttctgggttggcaacaccttcaatcttgaccaaagagacgtttgggt 5016 Query: 389 tgttaacgctcttggatctttggtatgacaaatgcttacctttgacgtacactgtaaaaa 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5015 tgttaacgctcttggatctttggtatgacaaatgcttacctttgacgtacactgtaaaaa 4956 Query: 449 ttaaaccacgtagggatgaaaaaaggtagtaaggggtgagttttttaattggaggtccag 508 ||||||||||||||||||||||| | |||||| ||||||| ||||||||||||||||||| Sbjct: 4955 ttaaaccacgtagggatgaaaaaggttagtaa-gggtgag-tttttaattggaggtccag 4898 Query: 509 atagtacaagttatgctgccaccgagtgaataaaataattttctttcatgaaaaccggaa 568 |||||||| || ||||||||| ||||||||||||||||| ||| | |||||||| | ||| Sbjct: 4897 atagtacaggtaatgctgcca-cgagtgaataaaataatattcatccatgaaaa-cagaa 4840 Query: 569 cctcatatgattgtgataattattgaagaagattccccatttgaaagggaatgaacat 626 |||||||||||||| |||| || |||||| || ||||||| | |||||||||||||| Sbjct: 4839 cctcatatgattgtcataa-taatgaagagtataccccattag-aagggaatgaacat 4784 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7956 Number of Sequences: 1807 Number of extensions: 7956 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 1022 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1006 effective length of database: 10,329,639 effective search space: 10391616834 effective search space used: 10391616834 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)