BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC1ZG05RM1.SCF screened BAC_end
         (1027 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1593                                                        1756   0.0  

>3x_Contig1593 
          Length = 10902

 Score = 1756 bits (886), Expect = 0.0
 Identities = 918/924 (99%), Gaps = 4/924 (0%)
 Strand = Plus / Plus

                                                                        
Query: 51   tgagagtagcgaattcgaaaatcgatgcttcagagccactttaggagaactcatactggg 110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3680 tgagagtagcgaattcgaaaatcgatgcttcagagccactttaggagaactcatactggg 3739

                                                                        
Query: 111  agatgacagtgactgtggaccataggatgatgcattatgtgttggtgaacttttattcaa 170
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3740 agatgacagtgactgtggaccataggatgatgcattatgtgttggtgaacttttattcaa 3799

                                                                        
Query: 171  agaggagcctgtggtagaatggctaggtatctcgagagcctgcgaaagatcaaacgaagt 230
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3800 agaggagcctgtggtagaatggctaggtatctcgagagcctgcgaaagatcaaacgaagt 3859

                                                                        
Query: 231  ttcctctggttcgctatttttcgtatccaacaccggcgatatcgtatctgaagactctgt 290
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3860 ttcctctggttcgctatttttcgtatccaacaccggcgatatcgtatctgaagactctgt 3919

                                                                        
Query: 291  ctccgaagatgataccgaacttagatttcctcccgtctcctcttgatatatgagtgcagc 350
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3920 ctccgaagatgataccgaacttagatttcctcccgtctcctcttgatatatgagtgcagc 3979

                                                                        
Query: 351  tttagtttccacgtctggcaatggagggagtaacagttcttcctctctatcggtcagttc 410
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3980 tttagtttccacgtctggcaatggagggagtaacagttcttcctctctatcggtcagttc 4039

                                                                        
Query: 411  agtgccttccattatggcgttcgccgtactattttctgtcgtttcttgttctagactatc 470
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4040 agtgccttccattatggcgttcgccgtactattttctgtcgtttcttgttctagactatc 4099

                                                                        
Query: 471  gtcgataacaagccccagaaatcttgtttcaatctctggttgtttctgaaccgctacccc 530
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4100 gtcgataacaagccccagaaatcttgtttcaatctctggttgtttctgaaccgctacccc 4159

                                                                        
Query: 531  aataggaagtgcagtagactccatcccaagaccaatatttaagccctcttgttcattttt 590
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4160 aataggaagtgcagtagactccatcccaagaccaatatttaagccctcttgttcattttt 4219

                                                                        
Query: 591  ggactctgataacaagttgtttgaagacatctcagtgattataacggacgcctctccagt 650
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4220 ggactctgataacaagttgtttgaagacatctcagtgattataacggacgcctctccagt 4279

                                                                        
Query: 651  attctgggacgcagataactcagaagcattatcttcctcctcctttatatcctgcaacgc 710
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4280 attctgggacgcagataactcagaagcattatcttcctcctcctttatatcctgcaacgc 4339

                                                                        
Query: 711  agtgctagggtttgccattacgaattaacgaatgctttgaatgctgtttcggagataaaa 770
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4340 agtgctagggtttgccattacgaattaacgaatgctttgaatgctgtttcggagataaaa 4399

                                                                        
Query: 771  tcctgctatagacacaacagagcggcaatgcaaccaggtctgccaaggtgttaaaaaaga 830
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4400 tcctgctatagacacaacagagcggcaatgcaaccaggtctgccaaggtgttaaaaaaga 4459

                                                                        
Query: 831  ttgatcaaaagagacacacgattatttcgaaatcctttccagtatattcaacaggttcaa 890
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4460 ttgatcaaaagagacacacgattatttcgaaatcctttccagtatattcaacaggttcaa 4519

                                                                        
Query: 891  cacaagcacagacacgagagatgttttaatcca-ccactaccgnnctat-tgtatcaat- 947
            ||||||||||||||||||||||||||||||||| |||||||||  |||| ||||||||| 
Sbjct: 4520 cacaagcacagacacgagagatgttttaatccacccactaccggcctatatgtatcaata 4579

                                    
Query: 948  acagctca-cctatcctgacttca 970
            |||||||| |||||||||||||||
Sbjct: 4580 acagctcaccctatcctgacttca 4603


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6264
Number of Sequences: 1807
Number of extensions: 6264
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 1027
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1011
effective length of database: 10,329,639
effective search space: 10443265029
effective search space used: 10443265029
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)