BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZG07RM1.SCF screened BAC_end (1034 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1563 1457 0.0 >3x_Contig1563 Length = 10839 Score = 1457 bits (735), Expect = 0.0 Identities = 802/818 (98%), Gaps = 5/818 (0%) Strand = Plus / Minus Query: 49 tgatgattctgaacgtaaggctcaggcagattttgatagacaattccagttgatgatgga 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10307 tgatgattctgaacgtaaggctcaggcagattttgatagacaattccagttgatgatgga 10248 Query: 109 cgagtctctgggcagcataaaaaatgaaactgttcagtccgtcagtatgccaatgcattt 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10247 cgagtctctgggcagcataaaaaatgaaactgttcagtccgtcagtatgccaatgcattt 10188 Query: 169 ctcatcacaagcaccaaaatcggacattccgtcagaaacgccaaagggtggtaagattcc 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10187 ctcatcacaagcaccaaaatcggacattccgtcagaaacgccaaagggtggtaagattcc 10128 Query: 229 attcatgttcctaagtagatccggtaagaagacgcaagcacattcaatcaatgttccatc 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10127 attcatgttcctaagtagatccggtaagaagacgcaagcacattcaatcaatgttccatc 10068 Query: 289 tgaaacaaaattcgtgtcggaaatattggaggaagaacagcgcgtgaaagaagagcgtca 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10067 tgaaacaaaattcgtgtcggaaatattggaggaagaacagcgcgtgaaagaagagcgtca 10008 Query: 349 aaagattaagagcattgttatgaatcgtaactttgattaaatagaatcttatctaattat 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10007 aaagattaagagcattgttatgaatcgtaactttgattaaatagaatcttatctaattat 9948 Query: 409 cggtctatacatttgtatgaaacaagcaacattgtatctcattcgactttgataactact 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9947 cggtctatacatttgtatgaaacaagcaacattgtatctcattcgactttgataactact 9888 Query: 469 actgtaatgtcatcctctttaccaccgctgtaatattgacctgcaagtttagagtactcc 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9887 actgtaatgtcatcctctttaccaccgctgtaatattgacctgcaagtttagagtactcc 9828 Query: 529 tgagagaagacacttgggaaggtaggatctttactaatggtaaccactttgtcaacaaac 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9827 tgagagaagacacttgggaaggtaggatctttactaatggtaaccactttgtcaacaaac 9768 Query: 589 tcttgagttatatcttgtaaagactgtgatgactcaatcttatctttcaggaacatttcc 648 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 9767 tcttgagttatatcttgtaaagactgtgatgactcaatcttatctttcaggaacaattcc 9708 Query: 649 atgtcttcgacagctatattatcggtgacaccgtcagttgcaagaacaacgatgtcattt 708 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9707 atgtcttcgacagctatattatcggtgacaccgtcagttgcaagaacaacgatgtcattt 9648 Query: 709 ttttgtatttgaaaactgt-atcatctgcatcagttcgtttattcataataaatgagcca 767 ||||||| || ||||||| ||||||||||||||| ||||||||||||||||||||||| Sbjct: 9647 ttttgtaatttgaaactgtaatcatctgcatcagtcggtttattcataataaatgagcca 9588 Query: 768 tttttctttttcagcagcctcta-tatatgcctttggaatgattgctagctggtattgga 826 |||||| |||||||||||||||| |||||| ||| |||||||||||||||||||| |||| Sbjct: 9587 tttttc-ttttcagcagcctctattatatg-cttgggaatgattgctagctggta-tgga 9531 Query: 827 gcattaaanccacggttctgaaactttgtttcgaaggt 864 |||||||| ||| | |||||||||||||||||||||| Sbjct: 9530 gcattaaatccaacggtctgaaactttgtttcgaaggt 9493 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8303 Number of Sequences: 1807 Number of extensions: 8303 Number of successful extensions: 55 Number of sequences better than 1.0e-20: 1 length of query: 1034 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1018 effective length of database: 10,329,639 effective search space: 10515572502 effective search space used: 10515572502 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)