BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZG08FM1.SCF screened BAC_end (1004 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1760 1289 0.0 >3x_Contig1760 Length = 27266 Score = 1289 bits (650), Expect = 0.0 Identities = 732/749 (97%), Gaps = 8/749 (1%) Strand = Plus / Plus Query: 86 ctgcaaacctctcatcttcatctgcttgttcaaaaacgaagcactaccaacatctccgga 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20529 ctgcaaacctctcatcttcatctgcttgttcaaaaacgaagcactaccaacatctccgga 20588 Query: 146 taccatggtgtctggcttacgatcttactatagtctgatattccctaaacacctctatgc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20589 taccatggtgtctggcttacgatcttactatagtctgatattccctaaacacctctatgc 20648 Query: 206 ttctaggattctagaatctttttgtcttgtatttcatctcatctcatcgcatggactgaa 265 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 20649 ttctaggattctagaatctttgcgtcttgtatttcatctcatctcatcgcatggactgaa 20708 Query: 266 gatatgtatctgcattttaaagctttgaggactttactaactccaacctttagacaattt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20709 gatatgtatctgcattttaaagctttgaggactttactaactccaacctttagacaattt 20768 Query: 326 ataaaataaaaagatggataagtaacatatatagtaccctgattaaacctccaaccttgt 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20769 ataaaataaaaagatggataagtaacatatatagtaccctgattaaacctccaaccttgt 20828 Query: 386 ggtatctgattactgttggtacaattcataatagtttcaactgatgttcaagaacgtttt 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20829 ggtatctgattactgttggtacaattcataatagtttcaactgatgttcaagaacgtttt 20888 Query: 446 cagccgtcttttaagacctcaggctagattttacaatactccgattccaagagtcactta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20889 cagccgtcttttaagacctcaggctagattttacaatactccgattccaagagtcactta 20948 Query: 506 taaaagattcaatggccgcacaggaaactcattcacacagctgttattcgacaaaacctc 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20949 taaaagattcaatggccgcacaggaaactcattcacacagctgttattcgacaaaacctc 21008 Query: 566 gaggaaatacctcgctatagtgtttggtaccggatcgttattctatttgactcatttaga 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21009 gaggaaatacctcgctatagtgtttggtaccggatcgttattctatttgactcatttaga 21068 Query: 626 agaggctcctgttaccgcgagaacaagg-ttatctggttgccaaggtcacttgaactcca 684 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 21069 agaggctcctgttaccgcgagaacaaggtttatctggttgccaaggtcacttgaactcaa 21128 Query: 685 gattggccaatacactttacactcggttcttagtgagactaaggngaaaatcctaccgg- 743 ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct: 21129 gattggccaatacacttacaactcggttcttagtgagactaaggggaaaatcctaccgga 21188 Query: 744 atcgcatcca-taacgaggaaagtgacc-agatttt-caccggattgtgga-gctgctga 799 |||||||||| ||||||||||||||||| ||||||| |||||||||||||| |||||||| Sbjct: 21189 atcgcatccattaacgaggaaagtgaccaagattttccaccggattgtggaggctgctga 21248 Query: 800 -ccccatccaagtgt-gatcaaagcctgt 826 | | |||||||||| ||||||||||||| Sbjct: 21249 gcacgatccaagtgtggatcaaagcctgt 21277 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6662 Number of Sequences: 1807 Number of extensions: 6662 Number of successful extensions: 290 Number of sequences better than 1.0e-20: 1 length of query: 1004 length of database: 10,358,551 effective HSP length: 16 effective length of query: 988 effective length of database: 10,329,639 effective search space: 10205683332 effective search space used: 10205683332 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)