BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZG09FM1.SCF screened BAC_end (1022 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1698 1289 0.0 >3x_Contig1698 Length = 21001 Score = 1289 bits (650), Expect = 0.0 Identities = 738/758 (97%), Gaps = 7/758 (0%) Strand = Plus / Minus Query: 87 atcatcagatttgcctacgttttctaagatatccaagagtttttggatatcagagttttc 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10296 atcatcagatttgcctacgttttctaagatatccaagagtttttggatatcagagttttc 10237 Query: 147 gtcgaaattcaaggaatccaaccttgttgcgttagtctcgattgcaatttcgtttcgcag 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10236 gtcgaaattcaaggaatccaaccttgttgcgttagtctcgattgcaatttcgtttcgcag 10177 Query: 207 cctcccgcttgattctgtttt-gatattgaagagtttgatgatccaaactgagagaacgc 265 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10176 cctcccgcttgattctgtttgagatattgaagagtttgatgatccaaactgagagaacgc 10117 Query: 266 agttgagacatgcgagactatattaacatttctgtcatcgtggatatcgtattggaaatt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10116 agttgagacatgcgagactatattaacatttctgtcatcgtggatatcgtattggaaatt 10057 Query: 326 tggcttcaattcgtccgtatgtttcatgatcaactcagtcattttaccatggaaatcgag 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10056 tggcttcaattcgtccgtatgtttcatgatcaactcagtcattttaccatggaaatcgag 9997 Query: 386 agtagacattagttttaaaagttgtgcgcgtctaagcccagctggattattgcctaaatt 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9996 agtagacattagttttaaaagttgtgcgcgtctaagcccagctggattattgcctaaatt 9937 Query: 446 tctcatctttgtgaatatcctcaaagcgtggtccaaatgctcgtacgtttggtcatggat 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9936 tctcatctttgtgaatatcctcaaagcgtggtccaaatgctcgtacgtttggtcatggat 9877 Query: 506 accgaatgcagcgttgaacaatatcaacgtacaagcagatgtaaaaatgtattctctatc 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9876 accgaatgcagcgttgaacaatatcaacgtacaagcagatgtaaaaatgtattctctatc 9817 Query: 566 catataaccaaataatgcgaccatgttctgatccattagagcccacaaagacctattagt 625 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 9816 catataaccaaataatgcgaccatgttctgatccattagagcccacaaagacctaatagt 9757 Query: 626 attgatggatccttgtaaagaacaatttcaaca-ggatgagattgttcttgagtagttct 684 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 9756 attgatggatccttgtaaagaacaatt-caacaaggatgagattgttcttgagtagttct 9698 Query: 685 tcaaa-taatatatgcattagttacttcgaattg-ttgagctgaatggatgcgaaatgga 742 ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 9697 tcaaattaatatatgcattagttacttcgaattgtttgagctgaatggatgcgaaatgga 9638 Query: 743 ccaacattggtctgat-gccaaattcataccttgaaaatattcatggaaaacgttggacc 801 ||||| ||||||||| ||||||||||||||||| ||||||||| ||||||||||| | Sbjct: 9637 acaacaatggtctgatagccaaattcataccttggaaatattcagtgaaaacgttggtac 9578 Query: 802 aaagccttgaatcctggagattc-tttgagtgaaatca 838 |||| |||||| || ||||||| |||||||||||||| Sbjct: 9577 aaagtcttgaaatcttgagattcttttgagtgaaatca 9540 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7577 Number of Sequences: 1807 Number of extensions: 7577 Number of successful extensions: 59 Number of sequences better than 1.0e-20: 1 length of query: 1022 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1006 effective length of database: 10,329,639 effective search space: 10391616834 effective search space used: 10391616834 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)