BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZG12FM1.SCF screened BAC_end (1012 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig934 1392 0.0 >3x_Contig934 Length = 4039 Score = 1392 bits (702), Expect = 0.0 Identities = 777/794 (97%), Gaps = 6/794 (0%) Strand = Plus / Plus Query: 88 tgcagccttcaaaagtctccaataacagagtattcattaatcataggtatgtgcgtcttc 147 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2270 tgcagcctttaaaagtctccaataacagagtattcattaatcataggtatgtgcgtcttc 2329 Query: 148 tactcttgtctatcctgtagctcatccttattccttctcgagcatgtattggcgtcttat 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2330 tactcttgtctatcctgtagctcatccttattccttctcgagcatgtattggcgtcttat 2389 Query: 208 ttgaagaactcacgtgccgtgaatgaaattatgttaccctgaaaatagatactggagagg 267 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 2390 ttgaagaactcacgtgccgagaaagaaattatgttaccctgaaaatagatactggagagg 2449 Query: 268 aaaacatcaaacccgtgcatggtgataacagatgtgccatgcaaatttcctcgagacc-t 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 2450 aaaacatcaaacccgtgcatggtgataacagatgtgccatgcaaatttcctcgagaccct 2509 Query: 327 tttggggacaatagttcatgcatatacgacctgcatggacgttcttaataacaacgatta 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2510 tttggggacaatagttcatgcatatacgacctgcatggacgttcttaataacaacgatta 2569 Query: 387 tctgtaccattgaaatttgctcttctacattcaggtcttagtagttttcttttcggttaa 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2570 tctgtaccattgaaatttgctcttctacattcaggtcttagtagttttcttttcggttaa 2629 Query: 447 gagtgcaggtttactgaaaagtgaaaccatacaaagactcgtcgtcaagatgcaagtaca 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2630 gagtgcaggtttactgaaaagtgaaaccatacaaagactcgtcgtcaagatgcaagtaca 2689 Query: 507 gaatgttgatcgctccaagttcgctccaatgaagaatgatttgatgctcagagcagcttt 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2690 gaatgttgatcgctccaagttcgctccaatgaagaatgatttgatgctcagagcagcttt 2749 Query: 567 aggtgagaaggttgaaagaccaccatgttggattatgagacaggctggacgttatttacc 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2750 aggtgagaaggttgaaagaccaccatgttggattatgagacaggctggacgttatttacc 2809 Query: 627 agaataccatgaggtgaagaatggtcgtgactttttcgagacatgtcgtgatgcagaaat 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2810 agaataccatgaggtgaagaatggtcgtgactttttcgagacatgtcgtgatgcagaaat 2869 Query: 687 tgcttcagaaattactattcagcccgtgagacgttacgccggtttattggatgcagctat 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2870 tgcttcagaaattactattcagcccgtgagacgttacgccggtttattggatgcagctat 2929 Query: 747 tatcttcagtgatattc-tgtgatccctcaggccatgggtaataaaattgagatggttga 805 ||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 2930 tatcttcagtgatattcttgtgatccctcaggccatgggtatgaaagttgagatggttga 2989 Query: 806 tgggaaa-gcccttatttcccgg-accggtgagaactgaagagc-act-ccaaaggtatt 861 |||||| ||||| ||||||||| |||| ||||||||||||||| ||| | ||||||||| Sbjct: 2990 ggggaaaggccctcatttcccggaaccgttgagaactgaagagcaactacaaaaggtatt 3049 Query: 862 gaattataaggtca 875 | |||||||||||| Sbjct: 3050 ggattataaggtca 3063 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5813 Number of Sequences: 1807 Number of extensions: 5813 Number of successful extensions: 41 Number of sequences better than 1.0e-20: 1 length of query: 1012 length of database: 10,358,551 effective HSP length: 16 effective length of query: 996 effective length of database: 10,329,639 effective search space: 10288320444 effective search space used: 10288320444 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)