BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZG12RM1.SCF screened BAC_end (962 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1502 1162 0.0 >3x_Contig1502 Length = 14970 Score = 1162 bits (586), Expect = 0.0 Identities = 681/698 (97%), Gaps = 11/698 (1%) Strand = Plus / Plus Query: 42 ctttgagaaagcaaatttaagatcatcagaaacatctttcacccaatctgctgaattcta 101 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 6048 ctttgagaaagcaaatttaagatcaccagaaacatctttcacccaatctgctgaattcta 6107 Query: 102 ttcggcgttcaattctaacaaagttaatagtttgggtttatttgtttcatcaaaatgcat 161 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6108 ttcggcgttcaattctaacaaagttaatagtttgggtttatttgtttcatcaaaatgcat 6167 Query: 162 tactcaaacctttacatcattcaaaagctcaaaagatatcgtacgtgaaagctccttgaa 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6168 tactcaaacctttacatcattcaaaagctcaaaagatatcgtacgtgaaagctccttgaa 6227 Query: 222 gtccctaatatcattattgaggtcaatatgttctgattcctgtgacgaatcatctttaca 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6228 gtccctaatatcattattgaggtcaatatgttctgattcctgtgacgaatcatctttaca 6287 Query: 282 aaaacttgtggatgaggcttttaagaacatgaaaaccaacctgaataccgactataagat 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6288 aaaacttgtggatgaggcttttaagaacatgaaaaccaacctgaataccgactataagat 6347 Query: 342 tattatatccaacttgttaataaatgtaccaactttctccaatcaagtgtcttcaaaaat 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6348 tattatatccaacttgttaataaatgtaccaactttctccaatcaagtgtcttcaaaaat 6407 Query: 402 cgtggatgggttgagaacttatatttcgaaggaatccaatgagacagcattgaatattat 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6408 cgtggatgggttgagaacttatatttcgaaggaatccaatgagacagcattgaatattat 6467 Query: 462 gttatcagcatttttccaccatttgtcctcattagaaacagcagacgaagtttcaa-tgc 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 6468 gttatcagcatttttccaccatttgtcctcattagaaacagcagacgaagtttcaattgc 6527 Query: 521 tgccataaagtccggtttt-atgagaataag-tacctttgag-aagatatggtacaattc 577 ||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||| Sbjct: 6528 tgccataaagtccggttttaatgagaataagttacctttgagaaagatatggtacaattc 6587 Query: 578 ttttttatgc-acctaaacactgcaaacct-aatatcattgttcagcttgaagacg-aac 634 ||||||| || |||||||||||||||| || ||||||||||||||||| ||||||| ||| Sbjct: 6588 ttttttaagcaacctaaacactgcaaaactaaatatcattgttcagctcgaagacgaaac 6647 Query: 635 acttgcatatctgaaggaggtctgttat-atccatt-aaaaatggagaagg-tcagcata 691 ||||||||||||||||||||||||| || ||||||| |||||||||||||| |||||||| Sbjct: 6648 acttgcatatctgaaggaggtctgtaataatccattaaaaaatggagaaggttcagcata 6707 Query: 692 tggatgtttcgtttacattc-acattttattgacttga 728 |||||||||||||||||||| |||| |||||||||||| Sbjct: 6708 tggatgtttcgtttacattcaacatcttattgacttga 6745 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9008 Number of Sequences: 1807 Number of extensions: 9008 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 962 length of database: 10,358,551 effective HSP length: 16 effective length of query: 946 effective length of database: 10,329,639 effective search space: 9771838494 effective search space used: 9771838494 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)