BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZH03FM1.SCF screened BAC_end (1004 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1145 1243 0.0 >3x_Contig1145 Length = 5226 Score = 1243 bits (627), Expect = 0.0 Identities = 691/705 (98%), Gaps = 7/705 (0%) Strand = Plus / Plus Query: 88 tgtggcaggagaccaggattggagctttattcggccaagtctaggtgtagatctgtccat 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4274 tgtggcaggagaccaggattggagctttattcggccaagtctaggtgtagatctgtccat 4333 Query: 148 gtatatagtcaaaactcagtgatttttcaagattgtcaataataaaaggaaaataataac 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4334 gtatatagtcaaaactcagtgatttttcaagattgtcaataataaaaggaaaataataac 4393 Query: 208 aaactgaaatcttaaacaaagttcaccaaggcaggtacaattcgagctccccaagaaaca 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4394 aaactgaaatcttaaacaaagttcaccaaggcaggtacaattcgagctccccaagaaaca 4453 Query: 268 gaccgcactgaatcaggtaataccaatattatatcaaaattaaccaccaaaagcaaagag 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4454 gaccgcactgaatcaggtaataccaatattatatcaaaattaaccaccaaaagcaaagag 4513 Query: 328 gacaaaatggatccatttattcaggttttcaaggacacagaggaacaattgaaccaatta 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4514 gacaaaatggatccatttattcaggttttcaaggacacagaggaacaattgaaccaatta 4573 Query: 388 ttgcagatattagataggaagaagaaagggagatcgaacaccagttcgaaagagatctcg 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4574 ttgcagatattagataggaagaagaaagggagatcgaacaccagttcgaaagagatctcg 4633 Query: 448 gaaatcatctctgaggctcaagagactatccaagatctaaatgagagtatagaaatgatg 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4634 gaaatcatctctgaggctcaagagactatccaagatctaaatgagagtatagaaatgatg 4693 Query: 508 aaacaggaacaagctattcccgaatacgaaattcagacccgtgagaagtccatggcaaac 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4694 aaacaggaacaagctattcccgaatacgaaattcagacccgtgagaagtccatggcaaac 4753 Query: 568 ctggaatcaaaatttgaaac-atgccagtcgttaaatatcgagacaacccgcgacaccga 626 |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 4754 ctggaatcaaaa-ttgaaacaatgccagtcgttaaatatcgagacaacccgcgacaccga 4812 Query: 627 tgcagctacccaatcatcattgctgccgcagcaacaacagcgtggcgatttcttcgnatt 686 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 4813 tgcagctacccaatcatcattgctgccgcagcaacaacagcgtggcgattccttcga--t 4870 Query: 687 ttgaacatcgagggcactgcaggcaccgaccaatcagacgcgg-aaaccacgacgccgta 745 ||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 4871 ttggacatcgaggcaactgcaggcaccgaccaatcagacgcggcaaaccacgacgccgta 4930 Query: 746 caggagcaattacttcgtgaac-agaaaatc-attggacatgatt 788 |||||||||||||| ||||||| ||| |||| ||||||||||||| Sbjct: 4931 caggagcaattactccgtgaacaagacaatcaattggacatgatt 4975 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6992 Number of Sequences: 1807 Number of extensions: 6992 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 1004 length of database: 10,358,551 effective HSP length: 16 effective length of query: 988 effective length of database: 10,329,639 effective search space: 10205683332 effective search space used: 10205683332 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)