BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZH04RM1.SCF screened BAC_end (977 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1355 955 0.0 >3x_Contig1355 Length = 8652 Score = 955 bits (482), Expect = 0.0 Identities = 530/541 (97%), Gaps = 4/541 (0%) Strand = Plus / Plus Query: 46 ccctttttgttaaggggagactttgcacgttggaaacgaaaatttctcactgaattgatg 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7190 ccctttttgttaaggggagactttgcacgttggaaacgaaaatttctcactgaattgatg 7249 Query: 106 gagagctgaaaaaaatgtgaaataacaaaatgtgcaaaatataatgtttgatacggacat 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7250 gagagctgaaaaaaatgtgaaataacaaaatgtgcaaaatataatgtttgatacggacat 7309 Query: 166 actgatgcactagattggaaattcaggtgcatagtaaaaccctacttcactctggtattg 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7310 actgatgcactagattggaaattcaggtgcatagtaaaaccctacttcactctggtattg 7369 Query: 226 tcataacccaagtgctcattgaaatatagtgttacaacgattcaattgtgttatcgtgtt 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7370 tcataacccaagtgctcattgaaatatagtgttacaacgattcaattgtgttatcgtgtt 7429 Query: 286 tacgctggtgttgaaaaaaccaagtacgttgatcattttgcgttcttagttaatcactgg 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7430 tacgctggtgttgaaaaaaccaagtacgttgatcattttgcgttcttagttaatcactgg 7489 Query: 346 tttttatcagactttgatttgacactatttgtaattaaagacaataatatatcttcaaca 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7490 tttttatcagactttgatttgacactatttgtaattaaagacaataatatatcttcaaca 7549 Query: 406 gcaatttgtaattttaatttctgttgacaaaaacacaatcgattatagtctcacttcatt 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7550 gcaatttgtaattttaatttctgttgacaaaaacacaatcgattatagtctcacttcatt 7609 Query: 466 ttggcataatctttgtcagaaagttggat-ataatcattttncttat-ataatctgtcct 523 ||||||||||||||||||| ||||||||| ||||||||||| ||||| |||||||||||| Sbjct: 7610 ttggcataatctttgtcag-aagttggataataatcattttccttataataatctgtcct 7668 Query: 524 gtttgggaacttaagtgctggttaatgggtacttggaatcatttgtaaatt-aaccactc 582 |||||| |||||||||||||| ||||||||||| | ||||||||||||| |||||||| Sbjct: 7669 gtttggattcttaagtgctggtttatgggtacttgtattcatttgtaaattcaaccactc 7728 Query: 583 a 583 | Sbjct: 7729 a 7729 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7645 Number of Sequences: 1807 Number of extensions: 7645 Number of successful extensions: 41 Number of sequences better than 1.0e-20: 1 length of query: 977 length of database: 10,358,551 effective HSP length: 16 effective length of query: 961 effective length of database: 10,329,639 effective search space: 9926783079 effective search space used: 9926783079 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)