BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC1ZH05RM1.SCF screened BAC_end
         (1000 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1764                                                        1566   0.0  

>3x_Contig1764 
          Length = 22510

 Score = 1566 bits (790), Expect = 0.0
 Identities = 848/860 (98%), Gaps = 6/860 (0%)
 Strand = Plus / Minus

                                                                         
Query: 43    cttccactgtcagatgagcaatgactgtcgtagcgatggcctcgataccttcttgcaaga 102
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19429 cttccactgtcagatgagcaatgactgtcgtagcgatggcctcgataccttcttgcaaga 19370

                                                                         
Query: 103   tggaaagtttctgtcttctgacagttttaactttagtaccaatgaattctaaggcttgtt 162
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19369 tggaaagtttctgtcttctgacagttttaactttagtaccaatgaattctaaggcttgtt 19310

                                                                         
Query: 163   gttgcgtgtatatttttagttcggcagcttcttcgagattcaccgcgaagatatcttgat 222
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19309 gttgcgtgtatatttttagttcggcagcttcttcgagattcaccgcgaagatatcttgat 19250

                                                                         
Query: 223   aactgctatcattaccacaaactaactgcatgatttctaaatcagatacaacaccacaag 282
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19249 aactgctatcattaccacaaactaactgcatgatttctaaatcagatacaacaccacaag 19190

                                                                         
Query: 283   ccttcaaaacaactacaattggaacctcttctgcgatagagttatgttttaagtatattt 342
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19189 ccttcaaaacaactacaattggaacctcttctgcgatagagttatgttttaagtatattt 19130

                                                                         
Query: 343   tatcattcttggtgactacgtaagtcttagattttctttcgtgggtggaagatgtaacag 402
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19129 tatcattcttggtgactacgtaagtcttagattttctttcgtgggtggaagatgtaacag 19070

                                                                         
Query: 403   aagcttgtacgatgtttttcttctcatctgcttccacaatgatacgattcttagataatt 462
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19069 aagcttgtacgatgtttttcttctcatctgcttccacaatgatacgattcttagataatt 19010

                                                                         
Query: 463   gttcttgaactaagatgactttttcagtaccattaacaatgaaatatccacctggatcta 522
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19009 gttcttgaactaagatgactttttcagtaccattaacaatgaaatatccacctggatcta 18950

                                                                         
Query: 523   agggacattcatttaatttggccatatcattttctgctgcaccatctaatatacatttgt 582
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18949 agggacattcatttaatttggccatatcattttctgctgcaccatctaatatacatttgt 18890

                                                                         
Query: 583   ttgatctcaacattatgggcattctaccgatcttcacatctctatgcaacacaattgatc 642
             ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 18889 ttgatctcaacattatgggcattctaccgatctccacatctctatgcaacacaattgatc 18830

                                                                         
Query: 643   ttcctctggtgtattcaatatcaacaaagataggagtactgtatgtcatgtctcgtaatc 702
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18829 ttcctctggtgtattcaatatcaacaaagataggagtactgtatgtcatgtctcgtaatc 18770

                                                                         
Query: 703   tacattcatgtggtggggtcataatagctttgttgccgttatgtttgtatcctactccta 762
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 18769 tacattcatgtggtggggtcataatagctttgttgccgttatgtttgtatcctactctaa 18710

                                                                         
Query: 763   tgtcnatgtacttcaagt-anactctggatcgacatcagatattataacctcattagctt 821
             |||| ||||||||||||| | ||||||||||||||||||||| |||||||||||||||||
Sbjct: 18709 tgtcaatgtacttcaagtaaaactctggatcgacatcagataatataacctcattagctt 18650

                                                                         
Query: 822   tgatgatcttcttc-aatcaacatcc-caaagtaatt-aaagagtcc-aatgctgcttta 877
             |||||||||||||| ||||||||||| |||||||||| ||||||||| ||||||||||||
Sbjct: 18649 tgatgatcttcttcaaatcaacatccacaaagtaattaaaagagtccaaatgctgcttta 18590

                                 
Query: 878   ctaa-cctttcacctttaaa 896
             |||| |||||||||||||||
Sbjct: 18589 ctaaccctttcacctttaaa 18570


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7643
Number of Sequences: 1807
Number of extensions: 7643
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 1000
length of database: 10,358,551
effective HSP length: 16
effective length of query: 984
effective length of database: 10,329,639
effective search space: 10164364776
effective search space used: 10164364776
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)