BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZH07FM1.SCF screened BAC_end (1031 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig548 735 0.0 >3x_Contig548 Length = 2225 Score = 735 bits (371), Expect = 0.0 Identities = 494/526 (93%), Gaps = 8/526 (1%) Strand = Plus / Plus Query: 232 tgatctaccggttcctattttggaatctgaagataaatgggacagaaaaattgactatgc 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 391 tgatctaccggttcctattttggaatctgaagataaatgggacagaaaaattgactatgc 450 Query: 292 tccatctttaaacgaacagtacgatgttaggtggatgattgcaggtcgtgaatctgccga 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 451 tccatctttaaacgaacagtacgatgttaggtggatgattgcaggtcgtgaatctgccga 510 Query: 352 tggtttcgaatatggtcttttcgataaaggttccttccaagaaaccttgtctggttgggc 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 511 tggtttcgaatatggtcttttcgataaaggttccttccaagaaaccttgtctggttgggc 570 Query: 412 caagggtgttgttacaggtagagcccgtttaggtggtattccattaggtgttattgccgt 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 571 caagggtgttgttacaggtagagcccgtttaggtggtattccattaggtgttattgccgt 630 Query: 472 tgaaacaagaattgtcgaaaatttgattcctgctgatcctgctaatcctgattctaccga 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 631 tgaaacaagaattgtcgaaaatttgattcctgctgatcctgctaatcctgattctaccga 690 Query: 532 aatgttgattcaagaaagccgccaagtttggtatccaaattccgggttcaagacagcccc 591 |||||||||||||||| | |||||||||||||||||||||||| ||||||||||| ||| Sbjct: 691 aatgttgattcaagaagccggccaagtttggtatccaaattccgcgttcaagacag-ccc 749 Query: 592 agcttatc-atgacttcaatcatggggaacaattgccatttatgatccttaccacctggg 650 || |||| |||||||||||||||| |||||||||||||| |||||||| ||| || || Sbjct: 750 aggctatcaatgacttcaatcatggtgaacaattgccattaatgatcctagccaact-gg 808 Query: 651 agaggtttttttggtgggacaacttgattttgtccaacgaaatttttgaagtatgggttt 710 |||||||| | |||| ||||||| ||| | ||| ||||| || ||||||||||||| || Sbjct: 809 agaggtttctctggt-ggacaacgtga-tatgtacaacg-aagttttgaagtatgg--tt 863 Query: 711 tttttatcgtggatgccttggttggttaccaacagcctttaattac 756 ||| ||||| ||||| ||||||| |||| |||||||| ||||||| Sbjct: 864 ctttcatcgttgatgcattggttgattacaaacagcctataattac 909 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,451 Number of Sequences: 1807 Number of extensions: 13451 Number of successful extensions: 66 Number of sequences better than 1.0e-20: 1 length of query: 1031 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1015 effective length of database: 10,329,639 effective search space: 10484583585 effective search space used: 10484583585 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)