BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZH07RM1.SCF screened BAC_end (1048 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1499 803 0.0 >3x_Contig1499 Length = 7822 Score = 803 bits (405), Expect = 0.0 Identities = 444/452 (98%), Gaps = 4/452 (0%) Strand = Plus / Minus Query: 47 cagtaagcacttttttagcttagcatttaaaatgccaagcgctttcttaaattattgtgt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2822 cagtaagcacttttttagcttagcatttaaaatgccaagcgctttcttaaattattgtgt 2763 Query: 107 tttgattttcgatatatatgaatcctttaaacattgaacttcgaacttttcgaaaacgaa 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2762 tttgattttcgatatatatgaatcctttaaacattgaacttcgaacttttcgaaaacgaa 2703 Query: 167 agctaaaagttgcatgatagagggaaagagagttgagctgagttgagagatatctacact 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2702 agctaaaagttgcatgatagagggaaagagagttgagctgagttgagagatatctacact 2643 Query: 227 tcacggctttgaaggttgaagttattctatcgaccaatctagtggtaaatccgataaaat 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2642 tcacggctttgaaggttgaagttattctatcgaccaatctagtggtaaatccgataaaat 2583 Query: 287 cttttatcatcatgaaaccgtttttgacaggacactcagacctagtgcacgatattagtt 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2582 cttttatcatcatgaaaccgtttttgacaggacactcagacctagtgcacgatattagtt 2523 Query: 347 atgacttttacggtcgtcgagtcgcaacatgttccagcgaccaacatatcaagggtgttc 406 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2522 atgacttttacggtcgtcgagtcgcaacatgttccagcgaccaacatatcaa-ggtgttc 2464 Query: 407 aagctagacanggaaacgaatgagtggggaattgagcgaaagttgggaaggctcacgata 466 |||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 2463 aagctagacaaggaaacgaatgagt-gggaattgagcgaaagtt-ggaaggctcacgata 2406 Query: 467 gcaggaatgtgtctctttgtttgggccgcacc 498 |||| | |||||||| ||| |||||||||||| Sbjct: 2405 gcagtattgtgtctc-ttgattgggccgcacc 2375 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7119 Number of Sequences: 1807 Number of extensions: 7119 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 1048 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1032 effective length of database: 10,329,639 effective search space: 10660187448 effective search space used: 10660187448 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)