BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC1ZH08FM1.SCF screened BAC_end (1005 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1604 1221 0.0 >3x_Contig1604 Length = 15703 Score = 1221 bits (616), Expect = 0.0 Identities = 674/691 (97%), Gaps = 2/691 (0%) Strand = Plus / Plus Query: 87 ttaaaatttaaaatctaaaatccttaaatcccgaaaaagaactgatcttatgatgtgata 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8102 ttaaaatttaaaatctaaaatccttaaatcccgaaaaagaactgatcttatgatgtgata 8161 Query: 147 aattcaaacacatacacaaacctaaacgcaagcatagcctgctaagaaatgtggtttata 206 |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 8162 aattcaaacacatacacaaacctaaacgcaagcaaagcctgctaagacatgtggtttata 8221 Query: 207 cttagaaagaaatctgttanagtagt-acaatatatctttaaacgaacaaaaaccatgcg 265 |||||||||| |||||| | | | | ||||||||||||||||||||||||||||||||| Sbjct: 8222 cttagaaagacatctgtaattggaattacaatatatctttaaacgaacaaaaaccatgcg 8281 Query: 266 atgagatgttgctgttccgtgtgctctcgagcgatagaaagaaatttttcattacgcttt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8282 atgagatgttgctgttccgtgtgctctcgagcgatagaaagaaatttttcattacgcttt 8341 Query: 326 aagggaaatgggaaaaagtacggtcacgtgaaacaaagacacagagagggaacgccctgt 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8342 aagggaaatgggaaaaagtacggtcacgtgaaacaaagacacagagagggaacgccctgt 8401 Query: 386 tctaacatcagacacagggttggtggtaccaagggccccaccaatatctgtttaaccatt 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8402 tctaacatcagacacagggttggtggtaccaagggccccaccaatatctgtttaaccatt 8461 Query: 446 aaatatgcaaaactgatatatttcgatccaatcctgacatactctaaatcatttcaaatg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8462 aaatatgcaaaactgatatatttcgatccaatcctgacatactctaaatcatttcaaatg 8521 Query: 506 tcaaacgatgtgacaaaccgctgcaagattatggttcaatcttatacaggatttgcttcc 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8522 tcaaacgatgtgacaaaccgctgcaagattatggttcaatcttatacaggatttgcttcc 8581 Query: 566 accccggatgaatgcaattatacgcgtacataagttctgtacccgctttgctaccgacct 625 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 8582 accccggatgaatgcaattatacgcgtacataagttctgtaccccctttgctaccgacct 8641 Query: 626 taaattgcttcgcagtttggctatcatgacttattatcccctttcaagatggagaattgc 685 ||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||| Sbjct: 8642 taaattgcttcgcagtttggctatcttgtcttattatcccctttcaagttggagaattgc 8701 Query: 686 tcaatccattatgtactgaaattgttcaacaatcgtagtagcttttttttttt-gccact 744 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 8702 tcaatccattaggtactgaaattgttcaacaatcgtagtagctttttttttttggtcact 8761 Query: 745 cactattctccatttgctgaaacaaatttga 775 ||||||||||||| ||||||||||||||||| Sbjct: 8762 cactattctccatctgctgaaacaaatttga 8792 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,366 Number of Sequences: 1807 Number of extensions: 12366 Number of successful extensions: 60 Number of sequences better than 1.0e-20: 1 length of query: 1005 length of database: 10,358,551 effective HSP length: 16 effective length of query: 989 effective length of database: 10,329,639 effective search space: 10216012971 effective search space used: 10216012971 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)