BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC20ZA03RM1.SCF screened BAC_end (973 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1643 1657 0.0 >3x_Contig1643 Length = 10865 Score = 1657 bits (836), Expect = 0.0 Identities = 911/927 (98%), Gaps = 7/927 (0%) Strand = Plus / Minus Query: 48 ctgggttagatatgtcaaggtaagagactctaaacataacaatagagaatattatggtat 107 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1691 ctgggttagatatgtcaagg-aagagactctaaacataacaatagagaatattatggtat 1633 Query: 108 taattaatatactattagtgaaaggttggaatgtgaatgttgaagggtacgcgtactact 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1632 taattaatatactattagtgaaaggttggaatgtgaatgttgaagggtacgcgtactact 1573 Query: 168 gtaccactattcattaaaatttatcatatctcatccctgatacagaaattaattatggta 227 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1572 gtaccactattcattaaaatttatcatatctcatccctgatacagaaattaag-atggta 1514 Query: 228 cgtcgagcaaaattatttgacattgttactgaattaactgcatgatgatgtttagttttg 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1513 cgtcgagcaaaattatttgacattgttactgaattaactgcatgatgatgtttagttttg 1454 Query: 288 ttcgttagattcgttactggatggggtttgagtgttatcgttagcagttgcatcggactt 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1453 ttcgttagattcgttactggatggggtttgagtgttatcgttagcagttgcatcggactt 1394 Query: 348 ttcagcattattttcagtaacgttcttagaagacttttttctttggaacaaagagaaacc 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1393 ttcagcattattttcagtaacgttcttagaagacttttttctttggaacaaagagaaacc 1334 Query: 408 tggatgagattgttccttgctgtcaacgtcttcttctaattcatcttccttttctagatc 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1333 tggatgagattgttccttgctgtcaacgtcttcttctaattcatcttccttttctagatc 1274 Query: 468 gtcatcgtatagacccaacgcgttaccgtgatcttcgatttcagcaagagatagttttgg 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1273 gtcatcgtatagacccaacgcgttaccgtgatcttcgatttcagcaagagatagttttgg 1214 Query: 528 caagttggcagcgactctccatgcagcagtcttatcagtgtaagacttggcgaagatgat 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1213 caagttggcagcgactctccatgcagcagtcttatcagtgtaagacttggcgaagatgat 1154 Query: 588 atcgatttcttccaaagttctacctgcagtttctgggtagaagaagaagatgactggcaa 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1153 atcgatttcttccaaagttctacctgcagtttctgggtagaagaagaagatgactggcaa 1094 Query: 648 atagaggaagttaatacacgcgaagaataagtagcaaccccagccagcgtcttgaatgaa 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1093 atagaggaagttaatacacgcgaagaataagtagcaaccccagccagcgtcttgaatgaa 1034 Query: 708 aattggggtaaacatgacaacggncaagttacacaaccagttggtacatgtggaaaaggc 767 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1033 aattggggtaaacatgacaacggcaaagttacacaaccagttggtacatgtggaaaaggc 974 Query: 768 attagtcatgggacgaactctcatagaagcaatttctggtgggtaaatccatggtagaga 827 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 973 attagtcatggaacgaactctcatagaagcaatttctggtgggtaaatccatggtagaga 914 Query: 828 tagaatggacataccgaagaagacgattaacaagaaccaaccaacgggctgcacccctta 887 ||||||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| Sbjct: 913 tagaatggacataccgaagaagacgataaacaagaacaaaccaac-ggctgca-ccctta 856 Query: 888 gcattttgtgtagtgtcatgaaccaaacaggc-aatgttatcaagaaagaacaacctttg 946 |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||| Sbjct: 855 gcattttgtgtagtgtcatgaaccaaacaggcaaatgtaatcaagaaagaacaacc-ttg 797 Query: 947 acggaaagcaccc-acattaacaattt 972 || |||||||||| |||| |||||||| Sbjct: 796 accgaaagcacccaacataaacaattt 770 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8462 Number of Sequences: 1807 Number of extensions: 8462 Number of successful extensions: 70 Number of sequences better than 1.0e-20: 1 length of query: 973 length of database: 10,358,551 effective HSP length: 16 effective length of query: 957 effective length of database: 10,329,639 effective search space: 9885464523 effective search space used: 9885464523 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)