BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC20ZA07FM1.SCF screened BAC_end
         (930 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig806                                                         1294   0.0  

>3x_Contig806 
          Length = 2480

 Score = 1294 bits (653), Expect = 0.0
 Identities = 823/854 (96%), Gaps = 22/854 (2%)
 Strand = Plus / Minus

                                                                        
Query: 85   acgaattgagaaccaagtccaaggaccaattggaacaacaattggttgaattgaagaagg 144
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1593 acgaattgagaaccaagtccaaggaccaattggaacaacaattggttgaattgaagaagg 1534

                                                                        
Query: 145  aattggccgaattgaaggttcaaaaattgtccagaccatctttgccaaaaatcaacactg 204
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1533 aattggccgaattgaaggttcaaaaattgtccagaccatctttgccaaaaatcaacactg 1474

                                                                        
Query: 205  tcagaaagaacattttttgtgtcttgactgttatctctcaaaaccaaagacaagctgtca 264
            ||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1473 tcagaaagaacattgctcgtgtcttgactgttatctctcaaaaccaaagacaagctgtca 1414

                                                                        
Query: 265  gagaattgtacaagggtaagaagtaccaaccaaaggacttgagagccaagaagaccagag 324
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1413 gagaattgtacaagggtaagaagtaccaaccaaaggacttgagagccaagaagaccagag 1354

                                                                        
Query: 325  ctttgagaagagctttgaccaaattcgaagcttcccaagttactgaaaagcaaagaaaga 384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1353 ctttgagaagagctttgaccaaattcgaagcttcccaagttactgaaaagcaaagaaaga 1294

                                                                        
Query: 385  agcaaattgctttcccacaaagaaagtatgctatcaaggcttaagaaaccgttcttccta 444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1293 agcaaattgctttcccacaaagaaagtatgctatcaaggcttaagaaaccgttcttccta 1234

                                                                        
Query: 445  ttacattattaagaacgttttttcatgttaaattagtttacatctttctacataatctct 504
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1233 ttacattattaagaacgttttttcatgttaaattagtttacatctttctacataatctct 1174

                                                                        
Query: 505  aacatcattgttgtatttgagtacacgcattttgcaaaatagacacagggtttctgttta 564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1173 aacatcattgttgtatttgagtacacgcattttgcaaaatagacacagggtttctgttta 1114

                                                                        
Query: 565  atctcatgttagaatgatcctctgcatggaatcgaacgccacttgctgtgtcactttaag 624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1113 atctcatgttagaatgatcctctgcatggaatcgaacgccacttgctgtgtcactttaag 1054

                                                                        
Query: 625  attatattgacgaaattttttacctacatactttattttagtggggtatgctattctttc 684
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1053 attatattgacgaaattttttacctacatac-ttattttagtggggtatgctattctttc 995

                                                                        
Query: 685  ttcgaacgcttagattttctgaa-tccaaga-tttctccttcacttc--cgttgggtata 740
            ||||||||||||||||||||||| ||||||| |||||||||||  ||  |||||||||||
Sbjct: 994  ttcgaacgcttagattttctgaattccaagattttctccttcaactccacgttgggtata 935

                                                                        
Query: 741  a-ctcctcaag-ttcaat-gtgatctgttgaa-gggtctgttgagtcccttagc-aatgt 795
            | ||||||||| |||||| ||||||||||||| |||||||||||||| |||||| |||||
Sbjct: 934  acctcctcaagtttcaatggtgatctgttgaaggggtctgttgagtcgcttagcaaatgt 875

                                                                        
Query: 796  gnctt-atggtgcttttatcaat-gtaacttt-gaagtagggag-atgact-ggtctttc 850
            |  || ||||||||| ||||||| |||||||| ||||||||||| |||||| ||||||||
Sbjct: 874  gctttaatggtgcttctatcaatggtaactttggaagtagggagaatgactgggtctttc 815

                                                                        
Query: 851  -tgatag-ataca-taaaggatccaag-attcttctgga-catctcccatttc--agtct 903
             |||||| ||||| ||||||||||||| ||||||||||| |||||||||||||  |||||
Sbjct: 814  atgatagtatacattaaaggatccaagaattcttctggagcatctcccatttccaagtct 755

                          
Query: 904  tcttcttcctccag 917
            ||||||||||||||
Sbjct: 754  tcttcttcctccag 741


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8197
Number of Sequences: 1807
Number of extensions: 8197
Number of successful extensions: 72
Number of sequences better than 1.0e-20: 1
length of query: 930
length of database: 10,358,551
effective HSP length: 16
effective length of query: 914
effective length of database: 10,329,639
effective search space: 9441290046
effective search space used: 9441290046
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)