BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC20ZA07RM1.SCF screened BAC_end
         (954 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1676                                                        1489   0.0  

>3x_Contig1676 
          Length = 15800

 Score = 1489 bits (751), Expect = 0.0
 Identities = 817/833 (98%), Gaps = 5/833 (0%)
 Strand = Plus / Minus

                                                                        
Query: 47   tcttcagagccttttcagctttgacattttgagcctttctttctaaattcat-atatcct 105
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 5335 tcttcagagccttttcagctttgacattttgagcctttctttctaaattcatcatatcct 5276

                                                                        
Query: 106  tcc-cacagtgtttctttccc-cacaacgtgttctctcaaatgaagggaaagctctcttt 163
            ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 5275 tccacacagtgtttctttcccacacaacgtgttctctcaaatgaagggaaagctctcttt 5216

                                                                        
Query: 164  cagcttcttggaagttaaagacctcatgttgagggtccattaatccaatatcttttgcat 223
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 5215 cagcttcttggaagttaaagacctcatgttgagggtccattaatccaatagcttttgcat 5156

                                                                        
Query: 224  acatgactatgacttcattgatgtcattagataaattctcaatggtgtgttcattgaaca 283
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5155 acatgactatgacttcattgatgtcattagataaattctcaatggtgtgttcattgaaca 5096

                                                                        
Query: 284  catgcgatttctttgataaactctttaaataatcggtcttgatattactatccaaagatt 343
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5095 catgcgatttctttgataaactctttaaataatcggtcttgatattactatccaaagatt 5036

                                                                        
Query: 344  tatcgaattttttgcagatcttggcaaaaccagtttgattcaactcgataaaagatttta 403
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5035 tatcgaattttttgcagatcttggcaaaaccagtttgattcaactcgataaaagatttta 4976

                                                                        
Query: 404  attctgaaagttgagtgaaacaggcaacgattctcttcttcaaagtaatctgttgttcca 463
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4975 attctgaaagttgagtgaaacaggcaacgattctcttcttcaaagtaatctgttgttcca 4916

                                                                        
Query: 464  taataggatcagtagtggtgaaatcagttaccctggacagcgttggaagtatttcactgg 523
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4915 taataggatcagtagtggtgaaatcagttaccctggacagcgttggaagtatttcactgg 4856

                                                                        
Query: 524  taatggaatgcatgagcctagatcctactgaaccagttcttgctcttcgagcctggatct 583
            ||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||
Sbjct: 4855 taatggaatgcatgagcctagatcctactgaaccagttcgtattcttcgagcctggatct 4796

                                                                        
Query: 584  gcttattctgaccatcagactgctcttggtttccaatggaaaacccgtcctcgtcatcgt 643
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4795 gcttattctgaccatcagactgctcttggtttccaatggaaaacccgtcctcgtcatcgt 4736

                                                                        
Query: 644  cttcctcagaataaagatccatttctggctgtgaattgtattcagagatagaagatgatc 703
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4735 cttcctcagaataaagatccatttctggctgtgaattgtattcagagatagaagatgatc 4676

                                                                        
Query: 704  gccttgttccctgtctgttcagatcaccagtgcttgtattatgtatcgatctgttcatca 763
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4675 gccttgttccctgtctgttcagatcaccagtgcttgtattatgtatcgatctgttcatca 4616

                                                                        
Query: 764  gttcattctgggacgtagtcacgtcttcatacacttnaggattaatt-gccaagatcgac 822
            ||||||||||| |||||||||||||||||||||||| | || ||||| ||||||||||||
Sbjct: 4615 gttcattctggaacgtagtcacgtcttcatacacttca-gagtaattggccaagatcgac 4557

                                                                 
Query: 823  gtctcctgcttgttataaaacgagtcgatnttttccaactctttatccaacgc 875
            ||||||||| || |||||||||||||||| || ||||||||||||||||||||
Sbjct: 4556 gtctcctgcatggtataaaacgagtcgattttgtccaactctttatccaacgc 4504


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7202
Number of Sequences: 1807
Number of extensions: 7202
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 954
length of database: 10,358,551
effective HSP length: 16
effective length of query: 938
effective length of database: 10,329,639
effective search space: 9689201382
effective search space used: 9689201382
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)