BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC20ZA07RM1.SCF screened BAC_end (954 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1676 1489 0.0 >3x_Contig1676 Length = 15800 Score = 1489 bits (751), Expect = 0.0 Identities = 817/833 (98%), Gaps = 5/833 (0%) Strand = Plus / Minus Query: 47 tcttcagagccttttcagctttgacattttgagcctttctttctaaattcat-atatcct 105 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 5335 tcttcagagccttttcagctttgacattttgagcctttctttctaaattcatcatatcct 5276 Query: 106 tcc-cacagtgtttctttccc-cacaacgtgttctctcaaatgaagggaaagctctcttt 163 ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 5275 tccacacagtgtttctttcccacacaacgtgttctctcaaatgaagggaaagctctcttt 5216 Query: 164 cagcttcttggaagttaaagacctcatgttgagggtccattaatccaatatcttttgcat 223 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 5215 cagcttcttggaagttaaagacctcatgttgagggtccattaatccaatagcttttgcat 5156 Query: 224 acatgactatgacttcattgatgtcattagataaattctcaatggtgtgttcattgaaca 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5155 acatgactatgacttcattgatgtcattagataaattctcaatggtgtgttcattgaaca 5096 Query: 284 catgcgatttctttgataaactctttaaataatcggtcttgatattactatccaaagatt 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5095 catgcgatttctttgataaactctttaaataatcggtcttgatattactatccaaagatt 5036 Query: 344 tatcgaattttttgcagatcttggcaaaaccagtttgattcaactcgataaaagatttta 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5035 tatcgaattttttgcagatcttggcaaaaccagtttgattcaactcgataaaagatttta 4976 Query: 404 attctgaaagttgagtgaaacaggcaacgattctcttcttcaaagtaatctgttgttcca 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4975 attctgaaagttgagtgaaacaggcaacgattctcttcttcaaagtaatctgttgttcca 4916 Query: 464 taataggatcagtagtggtgaaatcagttaccctggacagcgttggaagtatttcactgg 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4915 taataggatcagtagtggtgaaatcagttaccctggacagcgttggaagtatttcactgg 4856 Query: 524 taatggaatgcatgagcctagatcctactgaaccagttcttgctcttcgagcctggatct 583 ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 4855 taatggaatgcatgagcctagatcctactgaaccagttcgtattcttcgagcctggatct 4796 Query: 584 gcttattctgaccatcagactgctcttggtttccaatggaaaacccgtcctcgtcatcgt 643 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4795 gcttattctgaccatcagactgctcttggtttccaatggaaaacccgtcctcgtcatcgt 4736 Query: 644 cttcctcagaataaagatccatttctggctgtgaattgtattcagagatagaagatgatc 703 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4735 cttcctcagaataaagatccatttctggctgtgaattgtattcagagatagaagatgatc 4676 Query: 704 gccttgttccctgtctgttcagatcaccagtgcttgtattatgtatcgatctgttcatca 763 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4675 gccttgttccctgtctgttcagatcaccagtgcttgtattatgtatcgatctgttcatca 4616 Query: 764 gttcattctgggacgtagtcacgtcttcatacacttnaggattaatt-gccaagatcgac 822 ||||||||||| |||||||||||||||||||||||| | || ||||| |||||||||||| Sbjct: 4615 gttcattctggaacgtagtcacgtcttcatacacttca-gagtaattggccaagatcgac 4557 Query: 823 gtctcctgcttgttataaaacgagtcgatnttttccaactctttatccaacgc 875 ||||||||| || |||||||||||||||| || |||||||||||||||||||| Sbjct: 4556 gtctcctgcatggtataaaacgagtcgattttgtccaactctttatccaacgc 4504 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7202 Number of Sequences: 1807 Number of extensions: 7202 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 954 length of database: 10,358,551 effective HSP length: 16 effective length of query: 938 effective length of database: 10,329,639 effective search space: 9689201382 effective search space used: 9689201382 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)