BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC20ZA08RM1.SCF screened BAC_end
         (967 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1247                                                        1677   0.0  

>3x_Contig1247 
          Length = 7218

 Score = 1677 bits (846), Expect = 0.0
 Identities = 890/904 (98%), Gaps = 1/904 (0%)
 Strand = Plus / Plus

                                                                        
Query: 48   atagaccggttagaaaaggtgaccactttatcgttagaggtggtatgagacaagtagagt 107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5347 atagaccggttagaaaaggtgaccactttatcgttagaggtggtatgagacaagtagagt 5406

                                                                        
Query: 108  tcaaggtcgtagacgttgagcctgaagagtacggtgttgttgcccaagatactgtcattc 167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5407 tcaaggtcgtagacgttgagcctgaagagtacggtgttgttgcccaagatactgtcattc 5466

                                                                        
Query: 168  atagtgaaggtgagccaattaacagagaagatgaagaaaataacatcaatgttttcggtt 227
            |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||
Sbjct: 5467 atagtgaaggtgagccaattaacagagaagatgaagaaaataacatcaatgaagtcggtt 5526

                                                                        
Query: 228  atgatgatattggtggttgtcgtaagcaaatggctcaaattagagaattggtcgaattgc 287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5527 atgatgatattggtggttgtcgtaagcaaatggctcaaattagagaattggtcgaattgc 5586

                                                                        
Query: 288  cattgagacacccacaactatttaaggccattggtatcaaacctccgaagggtattttga 347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5587 cattgagacacccacaactatttaaggccattggtatcaaacctccgaagggtattttga 5646

                                                                        
Query: 348  tgtacggtcctccaggtaccggtaaaactctaatggccagagctgtggctaacgagacag 407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5647 tgtacggtcctccaggtaccggtaaaactctaatggccagagctgtggctaacgagacag 5706

                                                                        
Query: 408  gtgcatttttcttcttaatcaatggtccagaagtcatgtccaagatggctggtgaatctg 467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5707 gtgcatttttcttcttaatcaatggtccagaagtcatgtccaagatggctggtgaatctg 5766

                                                                        
Query: 468  aatccaacttgagaaaggctttcgaagaagcagaaaagaatgctccggccattattttta 527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5767 aatccaacttgagaaaggctttcgaagaagcagaaaagaatgctccggccattattttta 5826

                                                                        
Query: 528  tcgatgaaattgattctattgcaccaaagcgtgacaagactaacggtgaagtggaaagaa 587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5827 tcgatgaaattgattctattgcaccaaagcgtgacaagactaacggtgaagtggaaagaa 5886

                                                                        
Query: 588  gagtcgtttctcaattattgactctaatggatggtatgaaggctagatccaacatcgttg 647
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5887 gagtcgtttctcaattattgactctaatggatggtatgaaggctagatccaacatcgttg 5946

                                                                        
Query: 648  tcattgcagccaccaatagacccaattctatcgatcctgctttgagaagattcggtagat 707
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5947 tcattgcagccaccaatagacccaattctatcgatcctgctttgagaagattcggtagat 6006

                                                                        
Query: 708  ttgatagagaagtcgatattggtgttcctgacgttactggtagattggaagtcttacgta 767
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6007 ttgatagagaagtcgatattggtgttcctgacgttactggtagattggaagtcttacgta 6066

                                                                        
Query: 768  ttcacactaaaaatatgaaagttggctgacgacgtcgacttagaaaagttggccgctgaa 827
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6067 ttcacactaaaaatatg-aagttggctgacgacgtcgacttagaaaagttggccgctgaa 6125

                                                                        
Query: 828  acccatggntatgttggtgctgatattgcctccctatgttcttgaactgctatgcaacaa 887
            |||||||| |||||||||||||||||||||||||||||||||  | ||||||||||||||
Sbjct: 6126 acccatggttatgttggtgctgatattgcctccctatgttctgaagctgctatgcaacaa 6185

                                                                        
Query: 888  attcgtgaaaagatggacctaattgactaanatgaaaaccgaattgaccccgaagtgttg 947
            |||||||||||||||||||||||||||| | ||||| ||  ||||||| |||||||||||
Sbjct: 6186 attcgtgaaaagatggacctaattgacttagatgaagacgaaattgacgccgaagtgttg 6245

                
Query: 948  gact 951
            ||||
Sbjct: 6246 gact 6249


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7077
Number of Sequences: 1807
Number of extensions: 7077
Number of successful extensions: 83
Number of sequences better than 1.0e-20: 1
length of query: 967
length of database: 10,358,551
effective HSP length: 16
effective length of query: 951
effective length of database: 10,329,639
effective search space: 9823486689
effective search space used: 9823486689
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)