BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC20ZA08RM1.SCF screened BAC_end (967 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1247 1677 0.0 >3x_Contig1247 Length = 7218 Score = 1677 bits (846), Expect = 0.0 Identities = 890/904 (98%), Gaps = 1/904 (0%) Strand = Plus / Plus Query: 48 atagaccggttagaaaaggtgaccactttatcgttagaggtggtatgagacaagtagagt 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5347 atagaccggttagaaaaggtgaccactttatcgttagaggtggtatgagacaagtagagt 5406 Query: 108 tcaaggtcgtagacgttgagcctgaagagtacggtgttgttgcccaagatactgtcattc 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5407 tcaaggtcgtagacgttgagcctgaagagtacggtgttgttgcccaagatactgtcattc 5466 Query: 168 atagtgaaggtgagccaattaacagagaagatgaagaaaataacatcaatgttttcggtt 227 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 5467 atagtgaaggtgagccaattaacagagaagatgaagaaaataacatcaatgaagtcggtt 5526 Query: 228 atgatgatattggtggttgtcgtaagcaaatggctcaaattagagaattggtcgaattgc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5527 atgatgatattggtggttgtcgtaagcaaatggctcaaattagagaattggtcgaattgc 5586 Query: 288 cattgagacacccacaactatttaaggccattggtatcaaacctccgaagggtattttga 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5587 cattgagacacccacaactatttaaggccattggtatcaaacctccgaagggtattttga 5646 Query: 348 tgtacggtcctccaggtaccggtaaaactctaatggccagagctgtggctaacgagacag 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5647 tgtacggtcctccaggtaccggtaaaactctaatggccagagctgtggctaacgagacag 5706 Query: 408 gtgcatttttcttcttaatcaatggtccagaagtcatgtccaagatggctggtgaatctg 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5707 gtgcatttttcttcttaatcaatggtccagaagtcatgtccaagatggctggtgaatctg 5766 Query: 468 aatccaacttgagaaaggctttcgaagaagcagaaaagaatgctccggccattattttta 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5767 aatccaacttgagaaaggctttcgaagaagcagaaaagaatgctccggccattattttta 5826 Query: 528 tcgatgaaattgattctattgcaccaaagcgtgacaagactaacggtgaagtggaaagaa 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5827 tcgatgaaattgattctattgcaccaaagcgtgacaagactaacggtgaagtggaaagaa 5886 Query: 588 gagtcgtttctcaattattgactctaatggatggtatgaaggctagatccaacatcgttg 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5887 gagtcgtttctcaattattgactctaatggatggtatgaaggctagatccaacatcgttg 5946 Query: 648 tcattgcagccaccaatagacccaattctatcgatcctgctttgagaagattcggtagat 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5947 tcattgcagccaccaatagacccaattctatcgatcctgctttgagaagattcggtagat 6006 Query: 708 ttgatagagaagtcgatattggtgttcctgacgttactggtagattggaagtcttacgta 767 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6007 ttgatagagaagtcgatattggtgttcctgacgttactggtagattggaagtcttacgta 6066 Query: 768 ttcacactaaaaatatgaaagttggctgacgacgtcgacttagaaaagttggccgctgaa 827 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 6067 ttcacactaaaaatatg-aagttggctgacgacgtcgacttagaaaagttggccgctgaa 6125 Query: 828 acccatggntatgttggtgctgatattgcctccctatgttcttgaactgctatgcaacaa 887 |||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 6126 acccatggttatgttggtgctgatattgcctccctatgttctgaagctgctatgcaacaa 6185 Query: 888 attcgtgaaaagatggacctaattgactaanatgaaaaccgaattgaccccgaagtgttg 947 |||||||||||||||||||||||||||| | ||||| || ||||||| ||||||||||| Sbjct: 6186 attcgtgaaaagatggacctaattgacttagatgaagacgaaattgacgccgaagtgttg 6245 Query: 948 gact 951 |||| Sbjct: 6246 gact 6249 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7077 Number of Sequences: 1807 Number of extensions: 7077 Number of successful extensions: 83 Number of sequences better than 1.0e-20: 1 length of query: 967 length of database: 10,358,551 effective HSP length: 16 effective length of query: 951 effective length of database: 10,329,639 effective search space: 9823486689 effective search space used: 9823486689 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)