BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC20ZB01RM1.SCF screened BAC_end (962 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1780 1752 0.0 >3x_Contig1780 Length = 27883 Score = 1752 bits (884), Expect = 0.0 Identities = 911/918 (99%), Gaps = 2/918 (0%) Strand = Plus / Plus Query: 47 tggcactgttagctaaagtgcttgcatcaaacaatggcgactttgaatttgcaataagtt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17816 tggcactgttagctaaagtgcttgcatcaaacaatggcgactttgaatttgcaataagtt 17875 Query: 107 catcgtccagtgtaggaatatccaatggtctggaatttgccaaggccatcttgaaaaaga 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17876 catcgtccagtgtaggaatatccaatggtctggaatttgccaaggccatcttgaaaaaga 17935 Query: 167 taaattaatgaaggatattttttgcaactgagttaaaaatattgacggttggaaaaaata 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17936 taaattaatgaaggatattttttgcaactgagttaaaaatattgacggttggaaaaaata 17995 Query: 227 tagatattgttaaagaactttcaaagaaaagaacacttcaacttaacaatgtaaggtctg 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17996 tagatattgttaaagaactttcaaagaaaagaacacttcaacttaacaatgtaaggtctg 18055 Query: 287 agaaaaaaatgaaataaaatattgctgttgtgaatcagtaccttggtgatgtttcgataa 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18056 agaaaaaaatgaaataaaatattgctgttgtgaatcagtaccttggtgatgtttcgataa 18115 Query: 347 aaaaaaagataaaagggcccagaataattaattaaaatctcttagacaccaaaacaggga 406 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 18116 aaaaaaagataaaagggcccagaataattaattaatatctcttagacaccaaaacaggga 18175 Query: 407 aattatgaaggaattcttgtataaactgcacttaccagtatgataaatgtattggcagct 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18176 aattatgaaggaattcttgtataaactgcacttaccagtatgataaatgtattggcagct 18235 Query: 467 attccaacctacttcttgagcctgtatcaatagatatattttctcaataaaaatatgtcg 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18236 attccaacctacttcttgagcctgtatcaatagatatattttctcaataaaaatatgtcg 18295 Query: 527 tttcagaggggaaaaacgacgctgacacaacacaggaacagttggtaagaaaaaagaatt 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18296 tttcagaggggaaaaacgacgctgacacaacacaggaacagttggtaagaaaaaagaatt 18355 Query: 587 gctaaaatcaaacacaaatgggtttacggaaccgtcaaatgatcctgactccagtgttat 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18356 gctaaaatcaaacacaaatgggtttacggaaccgtcaaatgatcctgactccagtgttat 18415 Query: 647 ttcctagataatccagaaacaaaaagacaccacggccgtcaagttaaggtttggtttttt 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18416 ttcctagataatccagaaacaaaaagacaccacggccgtcaagttaaggtttggtttttt 18475 Query: 707 ttcaaaacttaacggacttctgattcaaacagatagagataaaaaaaaggcagaactatg 766 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18476 ttcaaaacttaacggacttctgattcaaacagatagagataaaaaaaaggcagaactatg 18535 Query: 767 aaggatgctagcagctatgcgttccaacaagatcggctttttcactagtttgtataactg 826 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18536 aaggatgctagcagctatgcgttccaacaagatcggctttttcactagtttgtataactg 18595 Query: 827 tcactttggg-tttcaatnatcagttagcaagagtggaattgcaagaagntccactcaag 885 |||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 18596 tcactttgggttttcaataatcagttagcaagagtggaattgcaagaagttccactcaag 18655 Query: 886 -tgaatatgacttaaatcggataagtgacgaattacgcagagaacgattggatttttaga 944 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 18656 ttgaatatgacttaaatcggataagtgacgaattacgcagagaacgattagattttcaga 18715 Query: 945 ttgtcaaaaaaaaaaaaa 962 |||||||||||||||||| Sbjct: 18716 ttgtcaaaaaaaaaaaaa 18733 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 16,969 Number of Sequences: 1807 Number of extensions: 16969 Number of successful extensions: 135 Number of sequences better than 1.0e-20: 1 length of query: 962 length of database: 10,358,551 effective HSP length: 16 effective length of query: 946 effective length of database: 10,329,639 effective search space: 9771838494 effective search space used: 9771838494 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)