BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC20ZB02FM1.SCF screened BAC_end
         (927 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1527                                                        1582   0.0  

>3x_Contig1527 
          Length = 8131

 Score = 1582 bits (798), Expect = 0.0
 Identities = 834/842 (99%), Gaps = 3/842 (0%)
 Strand = Plus / Minus

                                                                        
Query: 87   aattaaaggcctctgtagaatagagaaaagtattaggatcgaaaaaggacgatttggaac 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6262 aattaaaggcctctgtagaatagagaaaagtattaggatcgaaaaaggacgatttggaac 6203

                                                                        
Query: 147  aatttctatgctaagagatgtgtttatccggaacacatttcacaagcttctgggttatca 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6202 aatttctatgctaagagatgtgtttatccggaacacatttcacaagcttctgggttatca 6143

                                                                        
Query: 207  atagcacaagtctttttccttggagttgaaaatatcgaactcactagcgtcggttggggc 266
            |||||||||| |  |  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6142 atagcacaag-caataaccttggagttgaaaatatcgaactcactagcgtcggttggggc 6084

                                                                        
Query: 267  ttgtttaacatcctcggcatcctttgctgactcggcaggagtaactggagtgactggttg 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6083 ttgtttaacatcctcggcatcctttgctgactcggcaggagtaactggagtgactggttg 6024

                                                                        
Query: 327  agtgtcatcaatttttagggatgctacgctgtttacgatagattcttcactagatggagc 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6023 agtgtcatcaatttttagggatgctacgctgtttacgatagattcttcactagatggagc 5964

                                                                        
Query: 387  tggagaaacttctttgaaagcctccacagccggtgtcacactttggtcattgacactggc 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5963 tggagaaacttctttgaaagcctccacagccggtgtcacactttggtcattgacactggc 5904

                                                                        
Query: 447  tttatgaggaatgtaaactgggcggttaagtttagaaagatcaacaacactattagcagc 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5903 tttatgaggaatgtaaactgggcggttaagtttagaaagatcaacaacactattagcagc 5844

                                                                        
Query: 507  ttgttctgcaacagacttatcgatagtaaattgaattgcagcagatgcagcttgtgttct 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5843 ttgttctgcaacagacttatcgatagtaaattgaattgcagcagatgcagcttgtgttct 5784

                                                                        
Query: 567  taggtagtacataccagtcttcaaaccctttttccatccgtagaaatgcatggaagttaa 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5783 taggtagtacataccagtcttcaaaccctttttccatccgtagaaatgcatggaagttaa 5724

                                                                        
Query: 627  cttacccatggttggtgcacgaatatggatatttaaggattgagattgatcaatgtaagc 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5723 cttacccatggttggtgcacgaatatggatatttaaggattgagattgatcaatgtaagc 5664

                                                                        
Query: 687  agcacggtcggccgccatgtcgataatatgcttttgagacaattcccaaacagtcttgta 746
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5663 agcacggtcggccgccatgtcgataatatgcttttgagacaattcccaaacagtcttgta 5604

                                                                        
Query: 747  taggtccttcaattcttgtgggatatttggtaagttctgaatggaaccattgtcggcaat 806
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5603 taggtccttcaattcttgtgggatatttggtaagttctgaatggaaccattgtcggcaat 5544

                                                                        
Query: 807  aatatgagatttcatagcttcatcccaaatacccaagtcaaccaagtcatgcaataagta 866
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5543 aatatgagatttcatagcttcatcccaaatacccaagtcaaccaagtcatgcaataagta 5484

                                                                        
Query: 867  tgggttgacaatttgggactcaccagac-aaacacgacgagagtacatgtttggatgtgt 925
            |||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 5483 tgggttgacaatttggaactcaccagacaaaacacgacgagagtacatg-ttggatgtgt 5425

              
Query: 926  at 927
            ||
Sbjct: 5424 at 5423


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5793
Number of Sequences: 1807
Number of extensions: 5793
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 927
length of database: 10,358,551
effective HSP length: 16
effective length of query: 911
effective length of database: 10,329,639
effective search space: 9410301129
effective search space used: 9410301129
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)