BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC20ZB02FM1.SCF screened BAC_end (927 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1527 1582 0.0 >3x_Contig1527 Length = 8131 Score = 1582 bits (798), Expect = 0.0 Identities = 834/842 (99%), Gaps = 3/842 (0%) Strand = Plus / Minus Query: 87 aattaaaggcctctgtagaatagagaaaagtattaggatcgaaaaaggacgatttggaac 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6262 aattaaaggcctctgtagaatagagaaaagtattaggatcgaaaaaggacgatttggaac 6203 Query: 147 aatttctatgctaagagatgtgtttatccggaacacatttcacaagcttctgggttatca 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6202 aatttctatgctaagagatgtgtttatccggaacacatttcacaagcttctgggttatca 6143 Query: 207 atagcacaagtctttttccttggagttgaaaatatcgaactcactagcgtcggttggggc 266 |||||||||| | | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6142 atagcacaag-caataaccttggagttgaaaatatcgaactcactagcgtcggttggggc 6084 Query: 267 ttgtttaacatcctcggcatcctttgctgactcggcaggagtaactggagtgactggttg 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6083 ttgtttaacatcctcggcatcctttgctgactcggcaggagtaactggagtgactggttg 6024 Query: 327 agtgtcatcaatttttagggatgctacgctgtttacgatagattcttcactagatggagc 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6023 agtgtcatcaatttttagggatgctacgctgtttacgatagattcttcactagatggagc 5964 Query: 387 tggagaaacttctttgaaagcctccacagccggtgtcacactttggtcattgacactggc 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5963 tggagaaacttctttgaaagcctccacagccggtgtcacactttggtcattgacactggc 5904 Query: 447 tttatgaggaatgtaaactgggcggttaagtttagaaagatcaacaacactattagcagc 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5903 tttatgaggaatgtaaactgggcggttaagtttagaaagatcaacaacactattagcagc 5844 Query: 507 ttgttctgcaacagacttatcgatagtaaattgaattgcagcagatgcagcttgtgttct 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5843 ttgttctgcaacagacttatcgatagtaaattgaattgcagcagatgcagcttgtgttct 5784 Query: 567 taggtagtacataccagtcttcaaaccctttttccatccgtagaaatgcatggaagttaa 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5783 taggtagtacataccagtcttcaaaccctttttccatccgtagaaatgcatggaagttaa 5724 Query: 627 cttacccatggttggtgcacgaatatggatatttaaggattgagattgatcaatgtaagc 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5723 cttacccatggttggtgcacgaatatggatatttaaggattgagattgatcaatgtaagc 5664 Query: 687 agcacggtcggccgccatgtcgataatatgcttttgagacaattcccaaacagtcttgta 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5663 agcacggtcggccgccatgtcgataatatgcttttgagacaattcccaaacagtcttgta 5604 Query: 747 taggtccttcaattcttgtgggatatttggtaagttctgaatggaaccattgtcggcaat 806 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5603 taggtccttcaattcttgtgggatatttggtaagttctgaatggaaccattgtcggcaat 5544 Query: 807 aatatgagatttcatagcttcatcccaaatacccaagtcaaccaagtcatgcaataagta 866 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5543 aatatgagatttcatagcttcatcccaaatacccaagtcaaccaagtcatgcaataagta 5484 Query: 867 tgggttgacaatttgggactcaccagac-aaacacgacgagagtacatgtttggatgtgt 925 |||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 5483 tgggttgacaatttggaactcaccagacaaaacacgacgagagtacatg-ttggatgtgt 5425 Query: 926 at 927 || Sbjct: 5424 at 5423 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5793 Number of Sequences: 1807 Number of extensions: 5793 Number of successful extensions: 36 Number of sequences better than 1.0e-20: 1 length of query: 927 length of database: 10,358,551 effective HSP length: 16 effective length of query: 911 effective length of database: 10,329,639 effective search space: 9410301129 effective search space used: 9410301129 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)