BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC20ZB04RM1.SCF screened BAC_end (954 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1451 1302 0.0 >3x_Contig1451 Length = 8346 Score = 1302 bits (657), Expect = 0.0 Identities = 662/664 (99%) Strand = Plus / Minus Query: 48 taaatctttgtaacactttattgagactttcatccttgataactaaaggttcattaatta 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 664 taaatctttgtaacactttattgagactttcatccttgataactaaaggttcattaatta 605 Query: 108 cctgttgcgaggtgttgccattctctgatgacacttgttgtaacaaactggaaagcctct 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 604 cctgttgcgaggtgttgccattctctgatgacacttgttgtaacaaactggaaagcctct 545 Query: 168 tcttcctttcttctgcatcctctttcacagatccatttttattctttgaacggcgtttat 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 544 tcttcctttcttctgcatcctctttcacagatccatttttattctttgaacggcgtttat 485 Query: 228 tagccttggctttctttaccatagtgcaatatctggtgggcagttgactgttgttatatt 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 484 tagccttggctttctttaccatagtgcaatatctggtgggcagttgactgttgttatatt 425 Query: 288 aataagcagtcgagccagaatactattgtatgctcatctgtcaatttgccttttttatgt 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 aataagcagtcgagccagaatactattgtatgctcatctgtcaatttgccttttttatgt 365 Query: 348 cctttattaagaccacatatatttttcaattaaatgttgaaatttataccattatattat 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 cctttattaagaccacatatatttttcaattaaatgttgaaatttataccattatattat 305 Query: 408 acgtgaacagatatggcaacattcaacggtcttgtatacatgtgatagatgctatatgac 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 acgtgaacagatatggcaacattcaacggtcttgtatacatgtgatagatgctatatgac 245 Query: 468 tatggataataacgaatcactcttctaaattcttgagtctatcgttgattgaatcggcga 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 tatggataataacgaatcactcttctaaattcttgagtctatcgttgattgaatcggcga 185 Query: 528 atttgttaaattgtacatcatcgtcattcactttccgcagtaagtcctgtaacttttgct 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 atttgttaaattgtacatcatcgtcattcactttccgcagtaagtcctgtaacttttgct 125 Query: 588 gaatatctgaggctatctcaaacacggtgggaacatcttcgttggaattaccactatttt 647 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 gaatatctgaagctatctcaaacacggtgggaacatcttcgttggaattaccactatttt 65 Query: 648 ctgatccttttggttcaggggtaacaattggttgtgtcgaaatcatcttntgaagtgatg 707 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 64 ctgatccttttggttcaggggtaacaattggttgtgtcgaaatcatcttttgaagtgatg 5 Query: 708 actg 711 |||| Sbjct: 4 actg 1 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7115 Number of Sequences: 1807 Number of extensions: 7115 Number of successful extensions: 40 Number of sequences better than 1.0e-20: 1 length of query: 954 length of database: 10,358,551 effective HSP length: 16 effective length of query: 938 effective length of database: 10,329,639 effective search space: 9689201382 effective search space used: 9689201382 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)