BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC20ZB09RM1.SCF screened BAC_end (971 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1339 1651 0.0 >3x_Contig1339 Length = 6194 Score = 1651 bits (833), Expect = 0.0 Identities = 880/893 (98%), Gaps = 2/893 (0%) Strand = Plus / Plus Query: 45 gcttggaactcttccaaaggaaagttagaaaaaatttgtgagaaaatatgaaaatgaaat 104 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1949 gcttggaactcttccaaaggaaagaaagaaaaaatttgtgagaaaatatgaaaatgaaat 2008 Query: 105 atataattcggaaagatgcatctcatcattgatacatcagttattgttgatgttgaagag 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2009 atataattcggaaagatgcatctcatcattgatacatcagttattgttgatgttgaagag 2068 Query: 165 gttgtagtaagaagtggttgttgctacgagacagataaacccaggaaacatgttttttgt 224 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 2069 gttgtagtaagaagtggttgttgctacgagacagataaacccaggaaacatgtctgctgc 2128 Query: 225 tacagagactaaaggtcttgtgttagaaaacacagcccgtagagatgctttaatcgctat 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2129 tacagagactaaaggtcttgtgttagaaaacacagcccgtagagatgctttaatcgctat 2188 Query: 285 cgagaagaaataccaaaagatttgggctgaggaacatcagttcgagatcgacgctcctac 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2189 cgagaagaaataccaaaagatttgggctgaggaacatcagttcgagatcgacgctcctac 2248 Query: 345 tttggatgaagaaaatgtttctgtcgatcctgaagaattgcaaaagaagtatccaaaatt 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2249 tttggatgaagaaaatgtttctgtcgatcctgaagaattgcaaaagaagtatccaaaatt 2308 Query: 405 catgtcttcatttgcatacccatatatgaacggtgtcttacacgctggtcactgtttcac 464 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2309 catgtcttcatt-gcatacccatatatgaacggtgtcttacacgctggtcactgtttcac 2367 Query: 465 cttatccaaggttgaattctctattggtttcgaaagaatgaacggtaagagggccctttt 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2368 cttatccaaggttgaattctctattggtttcgaaagaatgaacggtaagagggccctttt 2427 Query: 525 cccaatcggtttccactgtactggtatgccaatccttgcttgtgctgacaagttgaaaag 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2428 cccaatcggtttccactgtactggtatgccaatccttgcttgtgctgacaagttgaaaag 2487 Query: 585 agaagctgaactgtttggcaatgactattccaatgttccagctgaagatgcggaagaaga 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2488 agaagctgaactgtttggcaatgactattccaatgttccagctgaagatgcggaagaaga 2547 Query: 645 acaagaagccaaaccagctgcacaatccgacgatgttaccaagttcaaggctaagaagtc 704 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2548 acaagaagccaaaccagctgcacaatccgacgatgttaccaagttcaaggctaagaagtc 2607 Query: 705 aaaggccgctgctaagcaaggtcgtggtaaatatcaattcgaaatcatgttgcagttagg 764 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2608 aaaggccgctgctaagcaaggtcgtggtaaatatcaattcgaaatcatgttgcagttagg 2667 Query: 765 aattgccagagaagatgtcatcaaatttgccgatgccagctattggttaacttactttcc 824 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2668 aattgccagagaagatgtcatcaaatttgccgatgccagctattggttaacttacttccc 2727 Query: 825 acctcttactgaaaccgattgtacatcgttcggtgcccgtattgattggagaagatcttt 884 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2728 acctctaactgaaaccgattgtacatcgttcggtgcccgtattgattggagaagatcttt 2787 Query: 885 catcactaccgacctggatcc-ttttacgatcaatttatttaatggcaaatga 936 |||||||||||||||| |||| | |||||||||||||||| |||||||||||| Sbjct: 2788 catcactaccgacctgaatccatattacgatcaatttattaaatggcaaatga 2840 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8380 Number of Sequences: 1807 Number of extensions: 8380 Number of successful extensions: 73 Number of sequences better than 1.0e-20: 1 length of query: 971 length of database: 10,358,551 effective HSP length: 16 effective length of query: 955 effective length of database: 10,329,639 effective search space: 9864805245 effective search space used: 9864805245 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)