BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC20ZB12FM1.SCF screened BAC_end
         (967 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1577                                                        1631   0.0  

>3x_Contig1577 
          Length = 10627

 Score = 1631 bits (823), Expect = 0.0
 Identities = 870/879 (98%), Gaps = 5/879 (0%)
 Strand = Plus / Plus

                                                                         
Query: 86    cctttgagcatgaaccattattagaaggacagagatcagggaaatcttcgcatcgtaccc 145
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9653  cctttgagcatgaaccattattagaaggacagagatcagggaaatcttcgcatcgtaccc 9712

                                                                         
Query: 146   taggagccgttgcaccgcaaccgatcaatgtctctaattcgtcgtcgcctggggatgatt 205
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9713  taggagccgttgcaccgcaaccgatcaatgtctctaattcgtcgtcgcctggggatgatt 9772

                                                                         
Query: 206   tttccgacgatgatttcgaattgcccagggatccttctgatctcttgtacagtgtcagac 265
             ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9773  tttccgacgatgattccgaattgcccagggatccttctgatctcttgtacagtgtcagac 9832

                                                                         
Query: 266   gaggttatcgaaatttcatccataaatcaaagactcttttgaatattatgatattcatca 325
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9833  gaggttatcgaaatttcatccataaatcaaagactcttttgaatattatgatattcatca 9892

                                                                         
Query: 326   ataccttgtggttagtgacaactttcatcagtgattttttcttcaacatcaactttttga 385
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9893  ataccttgtggttagtgacaactttcatcagtgattttttcttcaacatcaactttttga 9952

                                                                         
Query: 386   gaaacagaataaccggtttccaggacttgactcttatttttgtttcaattgttgccaaca 445
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9953  gaaacagaataaccggtttccaggacttgactcttatttttgtttcaattgttgccaaca 10012

                                                                         
Query: 446   gtttaactctatggtttaacaaaattggttattattcctctttggatcagtatttgaacg 505
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10013 gtttaactctatggtttaacaaaattggttattattcctctttggatcagtatttgaacg 10072

                                                                         
Query: 506   tggttctttgtggattgacattgttcaacttacttacaaatttacttgtgaaatacatcc 565
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10073 tggttctttgtggattgacattgttcaacttacttacaaatttacttgtgaaatacatcc 10132

                                                                         
Query: 566   gtcaacgtatcgggttattaggagtgtgcacttatttatgggctgcagtatcgtttgctg 625
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10133 gtcaacgtatcgggttattaggagtgtgcacttatttatgggctgcagtatcgtttgctg 10192

                                                                         
Query: 626   ttagtgctgtcatggatcgttatctatattacttcaatacaaagttccaccctaacaatt 685
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10193 ttagtgctgtcatggatcgttatctatattacttcaatacaaagttccaccctaacaatt 10252

                                                                         
Query: 686   acgatgacgctgaagcagataatgacgaaaattcaccgcatcctaacgaacatagtcaca 745
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10253 acgatgacgctgaagcagataatgacgaaaattcaccgcatcctaacgaacatagtcaca 10312

                                                                         
Query: 746   agagcatcagaaatcgtcacaccctaaccgaatgggttagtattgggtttag-acaactg 804
             |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 10313 agagcatcagaaatcgtcacaccctaaccgaatgggttagtattgggtttagaacaactg 10372

                                                                         
Query: 805   ttaaaggtgtgttgttagtatttttcattttgttcacattaaacaattgttcttttctct 864
             |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 10373 ttaaaggtgtgttgttagtatttttcattttgttcacattaaacaa-tgttcttttctct 10431

                                                                         
Query: 865   cttgattccatattgaccactatagca-gtagcacaggtttcaactgtagcaaatgcagc 923
             |||||||||||||||||||||| |||| |||||||||||||||||||  |||||||||||
Sbjct: 10432 cttgattccatattgaccacta-agcaggtagcacaggtttcaactgaggcaaatgcagc 10490

                                                    
Query: 924   aagctacgatgcatttccatggggtagatgctgatcaca 962
             ||||||||||||| |||||| ||||||||||||||||||
Sbjct: 10491 aagctacgatgca-ttccattgggtagatgctgatcaca 10528


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7446
Number of Sequences: 1807
Number of extensions: 7446
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 1
length of query: 967
length of database: 10,358,551
effective HSP length: 16
effective length of query: 951
effective length of database: 10,329,639
effective search space: 9823486689
effective search space used: 9823486689
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)