BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC20ZB12RM1.SCF screened BAC_end (980 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1212 1681 0.0 >3x_Contig1212 Length = 5727 Score = 1681 bits (848), Expect = 0.0 Identities = 890/901 (98%), Gaps = 3/901 (0%) Strand = Plus / Minus Query: 78 cctttacatgcaacctttaagacactcttcctcataanccaggaatgagaaatatagtcg 137 ||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||| Sbjct: 5151 cctttacatgcaacctttaag-cactcttcctcataa-ccaggaatgagaa-tatagtcg 5095 Query: 138 attccatattgtgccaacttgtgatagctggtattattcttgacaaaaatgtccggttcc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5094 attccatattgtgccaacttgtgatagctggtattattcttgacaaaaatgtccggttcc 5035 Query: 198 ataacacccacgaagacagtctttatagcgcctgttttttggattattcggtctacgcat 257 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 5034 ataacacccacgaagacagtctttatagcgccagttgtttggattattcggtctacgcat 4975 Query: 258 ggcaagttaccactgagccttagagaacaaggttccattgttgtgtaaatgatggttcca 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4974 ggcaagttaccactgagccttagagaacaaggttccattgttgtgtaaatgatggttcca 4915 Query: 318 tctggaagtttcgcaccttctgattttgtgaagtatttatctaatgcacattgctcagca 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4914 tctggaagtttcgcaccttctgattttgtgaagtatttatctaatgcacattgctcagca 4855 Query: 378 tgagtatttcctggtaattctctcgaataaccggtggaaagtatatcagttccgttgaca 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4854 tgagtatttcctggtaattctctcgaataaccggtggaaagtatatcagttccgttgaca 4795 Query: 438 aggagtgcgcctacattaaaggcagtttgagtttcaccacaatttcttgcctcatctatc 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4794 aggagtgcgcctacattaaaggcagtttgagtttcaccacaatttcttgcctcatctatc 4735 Query: 498 gccaactccataaattttctgtgcggctcaatcgcccagtcagggaagtccgttctgtaa 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4734 gccaactccataaattttctgtgcggctcaatcgcccagtcagggaagtccgttctgtaa 4675 Query: 558 ctccataatttttttccatcagaatcaagctcggtggattcgtaccgataagcatgaagc 617 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4674 ctccataatttttttccatcagaatcaagctcggtggattcgtaccgataagcatgaagc 4615 Query: 618 cacaaatcaagatcatttggaccaggatctgaatatagctctgtgtcacaaatttcacat 677 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4614 cacaaatcaagatcatttggaccaggatctgaatatagctctgtgtcacaaatttcacat 4555 Query: 678 tgctgaccgagtaagacttcaccaaatgaatcaggatgcatccaactctcggcggactca 737 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4554 tgctgaccgagtaagacttcaccaaatgaatcaggatgcatccaactctcggcggactca 4495 Query: 738 gtcttgccgacaagatctaagctccctantatatctgagaaatctccttcgtaatctttg 797 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 4494 gtcttgccgacaagatctaagctccctataatatctgagaaatctccttcgtaatctttg 4435 Query: 798 cccaaggatggtccccaaatgtgaggatttgagtatataggatcgttagcaatgggatgt 857 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4434 cccaaggatggtccccaaatgtgaggatttgagtatataggatcgttagcaatgggatgt 4375 Query: 858 cctagatgttgtagatgaactctattttgatgagttctaccagtgaatggcttgcaccta 917 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 4374 cctagatgttgtagatgaactctaatttgatgagttctaccagtgaatggcttgcaccta 4315 Query: 918 acaatactagtcttgccatcgaaacttatnncttcaaagctagttcgagcttccttggca 977 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 4314 acaatactagtcttgccatcgaaacttatcctttcaaagctagttcgagcttccttggca 4255 Query: 978 c 978 | Sbjct: 4254 c 4254 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5425 Number of Sequences: 1807 Number of extensions: 5425 Number of successful extensions: 31 Number of sequences better than 1.0e-20: 1 length of query: 980 length of database: 10,358,551 effective HSP length: 16 effective length of query: 964 effective length of database: 10,329,639 effective search space: 9957771996 effective search space used: 9957771996 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)